Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Cryptococcus_20neoformans_20var._20grubii_20[genbank_20GCA_5F9001771
65.1_202017-04-19] 1,144 sequences; 18,447,454 total letters
Query= AAMG01000278.1
Length=318
Score E
Sequences producing significant alignments: (Bits) Value
seq329 297 3e-78
>seq329
Length=583
Score = 297 bits (328), Expect = 3e-78
Identities = 210/239 (88%), Gaps = 1/239 (0%)
Strand=Plus/Plus
Query 80 TTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTCGAATACATTAGCATGGAATAATA 139
||||||||||||||||||||||||||||| | || ||||||||||||||||||||||||
Sbjct 3 TTGAAAAAATTAGAGTGTTCAAAGCAGGCAATCGCCCGAATACATTAGCATGGAATAATA 62
Query 140 GAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACCGCCGTAATGATTAATAGGGA 199
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct 63 GAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGATCGCCGTAATGATTAATAGGGA 122
Query 200 TAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGGATTTATTGAAGACTA 259
|||||||| | |||||| ||| ||||||||||||||| |||| | |||||| |
Sbjct 123 CGGTCGGGGGCATTGGTATTCCGTTGCTAGAGGTGAAATTCTTAGATTGACGGAAGACCA 182
Query 260 ACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTGAACGAAAGTTAGGGG 318
|| ||||||||||| || ||||||| ||||||||| |||| ||||||| ||||||||
Sbjct 183 ACAACTGCGAAAGCATTTGCCAAGGACGTTTTCATTGATCA-AGAACGAAGGTTAGGGG 240
Score = 203 bits (224), Expect = 6e-50
Identities = 153/179 (85%), Gaps = 1/179 (1%)
Strand=Plus/Minus
Query 140 GAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACCGCCGTAATGATTAATAGGGA 199
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct 525 GAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGATCGCCGTAATGATTAATAGGGA 466
Query 200 TAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGGATTTATTGAAGACTA 259
|||||||| | |||||| ||| ||||||||||||||| |||| | |||| | |
Sbjct 465 CGGTCGGGGGCATTGGTATTCCGTTGCTAGAGGTGAAATTCTTAGATTGACGGAAGGCCA 406
Query 260 ACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTGAACGAAAGTTAGGGG 318
|| ||||||||||| || ||||||| ||||||||| |||| ||||||| ||||||||
Sbjct 405 ACAACTGCGAAAGCATTTGCCAAGGACGTTTTCATTGATCA-AGAACGAAGGTTAGGGG 348
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 915189530112
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |