Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Cryptococcus_20neoformans_20var._20grubii_20[genbank_20GCA_5F9001771
65.1_202017-04-19] 1,144 sequences; 18,447,454 total letters
Query= AAMG01000304.1
Length=683
Score E
Sequences producing significant alignments: (Bits) Value
seq1083 237 7e-60
>seq1083
Length=153399
Score = 237 bits (262), Expect = 7e-60
Identities = 192/231 (83%), Gaps = 10/231 (4%)
Strand=Plus/Minus
Query 457 GGTGTCAAACCCGTGCGCGTAATGAAAGTGAACGGAGGTGGGAACCCGTGAGGGTGCACC 516
|||| |||| || |||||||||||||||||| | ||| |||| || | || |||||
Sbjct 147383 GGTGAGAAACTCGAGCGCGTAATGAAAGTGAATGTAGGAGGGATCCGC--AAGGAGCACC 147326
Query 517 ATCGACCGATCCTGATGTCTTCGGATGGATTTGAGTAAGAGCATAGCTGTTGGGACCCGA 576
||||||||||| ||| | | |||||||||||||||||||||| || ||||||||||
Sbjct 147325 TTCGACCGATCCGGATCTTCTGTGATGGATTTGAGTAAGAGCATATATGCTGGGACCCGA 147266
Query 577 AAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGGTGGAGGCTCG-- 634
||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||
Sbjct 147265 AAGATGGTGAACTATGCCTGAATAGGGCGAAGCCAGGGGAAACTCTGGTGGAGGCTCGTA 147206
Query 635 --CAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTATAGGGGCGA 683
|||| ||||| |||||||||||| |||||||||||||||||||
Sbjct 147205 TATAGCGATTCTG----ATAAATCGATCGTCGAATTTGGGTATAGGGGCGA 147159
Score = 86.0 bits (94), Expect = 3e-14
Identities = 61/69 (88%), Gaps = 1/69 (1%)
Strand=Plus/Minus
Query 615 GAAACTCTGGTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTA 674
||||||| || ||||||||| |||| ||||| |||||||||||||||| | ||||||||
Sbjct 147101 GAAACTC-GGCGGAGGCTCGGAGCGATTCTGAGGTGCAAATCGATCGTCGACTTTGGGTA 147043
Query 675 TAGGGGCGA 683
|||||||||
Sbjct 147042 TAGGGGCGA 147034
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 2079975461200
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |