Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cryptococcus_20neoformans_20var._20grubii_20[genbank_20GCA_5F9001771 65.1_202017-04-19] 1,144 sequences; 18,447,454 total letters Query= AAMG01000304.1 Length=683 Score E Sequences producing significant alignments: (Bits) Value seq1083 237 7e-60 >seq1083 Length=153399 Score = 237 bits (262), Expect = 7e-60 Identities = 192/231 (83%), Gaps = 10/231 (4%) Strand=Plus/Minus Query 457 GGTGTCAAACCCGTGCGCGTAATGAAAGTGAACGGAGGTGGGAACCCGTGAGGGTGCACC 516 |||| |||| || |||||||||||||||||| | ||| |||| || | || ||||| Sbjct 147383 GGTGAGAAACTCGAGCGCGTAATGAAAGTGAATGTAGGAGGGATCCGC--AAGGAGCACC 147326 Query 517 ATCGACCGATCCTGATGTCTTCGGATGGATTTGAGTAAGAGCATAGCTGTTGGGACCCGA 576 ||||||||||| ||| | | |||||||||||||||||||||| || |||||||||| Sbjct 147325 TTCGACCGATCCGGATCTTCTGTGATGGATTTGAGTAAGAGCATATATGCTGGGACCCGA 147266 Query 577 AAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGGTGGAGGCTCG-- 634 ||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||| Sbjct 147265 AAGATGGTGAACTATGCCTGAATAGGGCGAAGCCAGGGGAAACTCTGGTGGAGGCTCGTA 147206 Query 635 --CAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTATAGGGGCGA 683 |||| ||||| |||||||||||| ||||||||||||||||||| Sbjct 147205 TATAGCGATTCTG----ATAAATCGATCGTCGAATTTGGGTATAGGGGCGA 147159 Score = 86.0 bits (94), Expect = 3e-14 Identities = 61/69 (88%), Gaps = 1/69 (1%) Strand=Plus/Minus Query 615 GAAACTCTGGTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTA 674 ||||||| || ||||||||| |||| ||||| |||||||||||||||| | |||||||| Sbjct 147101 GAAACTC-GGCGGAGGCTCGGAGCGATTCTGAGGTGCAAATCGATCGTCGACTTTGGGTA 147043 Query 675 TAGGGGCGA 683 ||||||||| Sbjct 147042 TAGGGGCGA 147034 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 2079975461200