Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cryptococcus_20neoformans_20var._20grubii_20[genbank_20GCA_5F9001771 65.1_202017-04-19] 1,144 sequences; 18,447,454 total letters Query= AAMG01000941.1 Length=299 Score E Sequences producing significant alignments: (Bits) Value seq103 109 9e-22 seq320 96.9 6e-18 >seq103 Length=183 Score = 109 bits (120), Expect = 9e-22 Identities = 63/65 (97%), Gaps = 0/65 (0%) Strand=Plus/Plus Query 231 CCTCTAGCCTCAAATTTCGAGGGACTAAAGGATCGATAGGCCACACTTTCATGGTTTGTA 290 |||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||| Sbjct 1 CCTCTAGCCTCAAACTCCGAGGGACTAAAGGATCGATAGGCCACACTTTCATGGTTTGTA 60 Query 291 TTCAC 295 ||||| Sbjct 61 TTCAC 65 >seq320 Length=48572 Score = 96.9 bits (106), Expect = 6e-18 Identities = 56/58 (97%), Gaps = 0/58 (0%) Strand=Plus/Plus Query 77 GCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTA 134 ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct 18252 GCTCACGTTCCCTATTAAGGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTA 18309 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 854390225664