Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cryptococcus_20neoformans_20var._20grubii_20[genbank_20GCA_5F9001771 65.1_202017-04-19] 1,144 sequences; 18,447,454 total letters Query= AAMG01002244.1 Length=504 Score E Sequences producing significant alignments: (Bits) Value seq345 434 3e-119 >seq345 Length=522 Score = 434 bits (480), Expect = 3e-119 Identities = 287/314 (91%), Gaps = 3/314 (1%) Strand=Plus/Minus Query 194 CCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGGCTCAAGGCCATGCGA 253 ||||||||||||||||||||||| ||||||||||| |||||||||| ||||||||||||| Sbjct 522 CCATCGAAAGTTGATAGGGCAGATATTTGAATGAAGCATCGCCGGCACAAGGCCATGCGA 463 Query 254 TTCGTTAAGTTATTATGAATCACCAAGGAGCCCCGAAGGGCGTTGGTTTTTTATCTAATA 313 |||| |||||||||||| |||||| ||| ||||| | |||||||||||||||||| Sbjct 462 TTCGAGAAGTTATTATGATTCACCATAGAGGGCCGAAACCCATTGGTTTTTTATCTAATA 403 Query 314 AATACACCCCTTCC-GAAGTCGGGG-TTTTTAGCATGTATTAGCTCTAGAATTACCACGG 371 |||||||||||||| |||||||||| |||| ||||||||||||||||||||||||||| | Sbjct 402 AATACACCCCTTCCAGAAGTCGGGGCTTTTCAGCATGTATTAGCTCTAGAATTACCACAG 343 Query 372 TTATCCATGTAGTAAGGTACTATCAAATAAACGATAACTGATTTAATGAGCCATTCGCAG 431 |||||||||||| ||| ||| ||||||||||| ||||||||||||||||||||||||||| Sbjct 342 TTATCCATGTAGCAAGATACCATCAAATAAACTATAACTGATTTAATGAGCCATTCGCAG 283 Query 432 TTTCACTGTATAGATT-GCTTATACTTAGACATGCATGGCTTAATCTTTGAGACAAGCAT 490 |||||| |||| ||| | ||||||||||||||||||||||||||||||||||||||||| Sbjct 282 TTTCACAGTATGAATTCGTTTATACTTAGACATGCATGGCTTAATCTTTGAGACAAGCAT 223 Query 491 ATGACTACTGGCAG 504 |||||||||||||| Sbjct 222 ATGACTACTGGCAG 209 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1510382721024