Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cryptococcus_20neoformans_20var._20grubii_20[genbank_20GCA_5F9001771 75.1_202017-04-19] 1,201 sequences; 18,463,082 total letters Query= AAMG01002194.1 Length=319 Score E Sequences producing significant alignments: (Bits) Value seq746 86.0 1e-14 >seq746 Length=726 Score = 86.0 bits (94), Expect = 1e-14 Identities = 113/152 (74%), Gaps = 10/152 (7%) Strand=Plus/Minus Query 171 GAACTGAAACATCTAAGTAGCTGCAGGAAAAGAAATCAACCGAGATTCCCAAAGTAGTGG 230 |||||||| ||||| |||| ||| |||||| |||| |||||| || | | |||||||||| Sbjct 250 GAACTGAAGCATCTTAGTAACTGTAGGAAAGGAAAACAACCGTGACTTCTAAAGTAGTGG 191 Query 231 CGAGCGAAATGGGATGAGCCTTTACGAGATAGTTGAATTGATAGTG--GAATCCTCTGGA 288 |||||||||| | | |||| | | || || ||| ||| || |||| || |||| Sbjct 190 CGAGCGAAATAGAACTAGCC----CAATATCATT--ATT-ATAATGCAGAATACTTTGGA 138 Query 289 AATAG-GAGCCATAGCGGGTGATAGCCCCGTA 319 || || | || ||| ||| ||||||| ||| Sbjct 137 AAAAGTAATCCGTAGAAGGTAATAGCCCTGTA 106 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 918388970016