Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Cryptococcus_20neoformans_20var._20grubii_20[genbank_20GCA_5F9001771
95.1_202017-04-19] 1,111 sequences; 18,377,618 total letters
Query= AAMG01000304.1
Length=683
Score E
Sequences producing significant alignments: (Bits) Value
seq501 219 2e-54
>seq501
Length=65911
Score = 219 bits (242), Expect = 2e-54
Identities = 135/144 (94%), Gaps = 0/144 (0%)
Strand=Plus/Minus
Query 540 GATGGATTTGAGTAAGAGCATAGCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAAT 599
|||||||||||||||||||||| || |||||||||||||||||||||||||||||||||
Sbjct 59799 GATGGATTTGAGTAAGAGCATATATGCTGGGACCCGAAAGATGGTGAACTATGCCTGAAT 59740
Query 600 AGGGTGAAGCCAGAGGAAACTCTGGTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGAT 659
|||| |||||||| ||||||||||||||||||||| |||| ||||| |||||||||||||
Sbjct 59739 AGGGCGAAGCCAGGGGAAACTCTGGTGGAGGCTCGTAGCGATTCTGACGTGCAAATCGAT 59680
Query 660 CGTCAAATTTGGGTATAGGGGCGA 683
|||| |||||||||||||||||||
Sbjct 59679 CGTCGAATTTGGGTATAGGGGCGA 59656
Score = 210 bits (232), Expect = 9e-52
Identities = 157/183 (86%), Gaps = 2/183 (1%)
Strand=Plus/Minus
Query 452 GTTTGGGTGTCAAACCCGTGCGCGTAATGAAAGTGAACGGAGGTGGGAACCCGTGAGGGT 511
||||| ||||||||| || |||||||||||||||||| | ||| |||| || | ||
Sbjct 60011 GTTTGAGTGTCAAACTCGAGCGCGTAATGAAAGTGAATGTAGGAGGGATCCGC--AAGGA 59954
Query 512 GCACCATCGACCGATCCTGATGTCTTCGGATGGATTTGAGTAAGAGCATAGCTGTTGGGA 571
||||| ||||||||||| ||| | | |||||||||||||||||||||| || | |||
Sbjct 59953 GCACCTTCGACCGATCCGGATCTTCTGTGATGGATTTGAGTAAGAGCATATATGCTTGGA 59894
Query 572 CCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGGTGGAGGC 631
|||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||
Sbjct 59893 CCCGAAAGATGGTGAACTATGCCTGAATAGGGCGAAGCCAGGGGAAACTCTGGTGGAGGC 59834
Query 632 TCG 634
|||
Sbjct 59833 TCG 59831
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 2079976169050
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |