Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cryptococcus_20neoformans_20var._20grubii_20[genbank_20GCA_5F9001771 95.1_202017-04-19] 1,111 sequences; 18,377,618 total letters Query= AAMG01000304.1 Length=683 Score E Sequences producing significant alignments: (Bits) Value seq501 219 2e-54 >seq501 Length=65911 Score = 219 bits (242), Expect = 2e-54 Identities = 135/144 (94%), Gaps = 0/144 (0%) Strand=Plus/Minus Query 540 GATGGATTTGAGTAAGAGCATAGCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAAT 599 |||||||||||||||||||||| || ||||||||||||||||||||||||||||||||| Sbjct 59799 GATGGATTTGAGTAAGAGCATATATGCTGGGACCCGAAAGATGGTGAACTATGCCTGAAT 59740 Query 600 AGGGTGAAGCCAGAGGAAACTCTGGTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGAT 659 |||| |||||||| ||||||||||||||||||||| |||| ||||| ||||||||||||| Sbjct 59739 AGGGCGAAGCCAGGGGAAACTCTGGTGGAGGCTCGTAGCGATTCTGACGTGCAAATCGAT 59680 Query 660 CGTCAAATTTGGGTATAGGGGCGA 683 |||| ||||||||||||||||||| Sbjct 59679 CGTCGAATTTGGGTATAGGGGCGA 59656 Score = 210 bits (232), Expect = 9e-52 Identities = 157/183 (86%), Gaps = 2/183 (1%) Strand=Plus/Minus Query 452 GTTTGGGTGTCAAACCCGTGCGCGTAATGAAAGTGAACGGAGGTGGGAACCCGTGAGGGT 511 ||||| ||||||||| || |||||||||||||||||| | ||| |||| || | || Sbjct 60011 GTTTGAGTGTCAAACTCGAGCGCGTAATGAAAGTGAATGTAGGAGGGATCCGC--AAGGA 59954 Query 512 GCACCATCGACCGATCCTGATGTCTTCGGATGGATTTGAGTAAGAGCATAGCTGTTGGGA 571 ||||| ||||||||||| ||| | | |||||||||||||||||||||| || | ||| Sbjct 59953 GCACCTTCGACCGATCCGGATCTTCTGTGATGGATTTGAGTAAGAGCATATATGCTTGGA 59894 Query 572 CCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGGTGGAGGC 631 |||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||| Sbjct 59893 CCCGAAAGATGGTGAACTATGCCTGAATAGGGCGAAGCCAGGGGAAACTCTGGTGGAGGC 59834 Query 632 TCG 634 ||| Sbjct 59833 TCG 59831 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 2079976169050