Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cryptococcus_20sp._20JCM_2024511_20[genbank_20GCA_5F001600855.1_2020 16-03-01] 55 sequences; 28,180,937 total letters Query= AAMG01000185.1 Length=266 Score E Sequences producing significant alignments: (Bits) Value seq10 104 4e-20 >seq10 Length=1243995 Score = 104 bits (114), Expect = 4e-20 Identities = 168/237 (71%), Gaps = 10/237 (4%) Strand=Plus/Plus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAAT--- 57 ||||| | |||||| || || || ||| ||||| | | ||||||| |||| | | | Sbjct 119854 GTACAGATGGCAGGAACATAATCCACGTGAGCTGGTT-ACTCGCGTTTACCACGTACATG 119912 Query 58 --TTCCTCGTTG--AAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCA 113 |||||||||| |||| ||| | |||||||| || |||||| |||| ||||| Sbjct 119913 TATTCCTCGTTGGGAAGAGCAATACTTGCAATGCTCAGTCCCCAACACGGCTGGGTTTCA 119972 Query 114 -AAGATTACCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGC 172 |||||||||| || |||||||||||| | ||||| || | |||||| | Sbjct 119973 CAAGATTACCCAAGCCGTTCGGCCAAGGTGCTGAACTCGCTGGCTCGGTCAGTGCTTCAT 120032 Query 173 GCGTGCGGCCCAGAACATCTAAGGGCA-TCACAGACCTGTTATTGCCTCAAACTTCC 228 |||||||| || ||||||| | || ||| | |||| ||||||| || ||| ||| Sbjct 120033 TAGTGCGGCCAAGGACATCTAGAGACATTCATATACCTATTATTGCTTCCAACCTCC 120089 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 751999599325