Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cryptococcus_20sp._20JCM_2024511_20[genbank_20GCA_5F001600855.1_2020 16-03-01] 55 sequences; 28,180,937 total letters Query= AAMG01000911.1 Length=280 Score E Sequences producing significant alignments: (Bits) Value seq10 116 6e-24 >seq10 Length=1243995 Score = 116 bits (128), Expect = 6e-24 Identities = 184/259 (71%), Gaps = 5/259 (2%) Strand=Plus/Plus Query 2 ACTCGGTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCAT-CACAG 60 ||||| |||||| ||||||| | |||||||| || ||||||| | ||| || | Sbjct 120007 ACTCGCTGGCTCGGTCAGTGCTTCATTAGTGCGGCCAAGGACATCTAGAGACATTCATAT 120066 Query 61 ACCTGTTATTGCCTCAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCCAGC 120 |||| ||||||| || ||| |||| ||| || || ||||| ||| | | | | Sbjct 120067 ACCTATTATTGCTTCCAACCTCCAACAGCTAGACGCTGTCAGTCC-TCTGAAGACCTCGA 120125 Query 121 CACCA-ACCATAGTCGATGGGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATT 179 |||| |||| || | |||||| | |||||| || |||| |||||| || ||||| Sbjct 120126 CACCCTACCAAAGGCCCCCTGGCTATCTGGCAGGTCAAAGTCTGGTTCGTCATAGGAATA 120185 Query 180 AACCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAG 239 | || |||||||| |||| ||||||||| | |||||| | || | | |||||||| Sbjct 120186 AGT--GAAAAATCACTTCACCGACTAAGAACTGTCATGCAACCCCCCTCCCCGAATCAAG 120243 Query 240 AAAGAGCTATCAATCTGTC 258 |||||| ||| ||| ||| Sbjct 120244 AAAGAGTTATTGATCCGTC 120262 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 796799575455