Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cryptococcus_20sp._20JCM_2024511_20[genbank_20GCA_5F001600855.1_2020 16-03-01] 55 sequences; 28,180,937 total letters Query= AAMG01002186.1 Length=328 Score E Sequences producing significant alignments: (Bits) Value seq10 187 5e-45 >seq10 Length=1243995 Score = 187 bits (206), Expect = 5e-45 Identities = 234/315 (74%), Gaps = 12/315 (4%) Strand=Plus/Minus Query 25 AGACCTTAACCTGCTAAATAGCCAGGCCCGCTTTGGCGGGTCGCCGGCTTCTT-AGAGGG 83 |||| || |||||| | ||||||||| |||||| || | || |||| ||||| Sbjct 120168 AGACTTTGACCTGCCAGATAGCCAGGGGGCCTTTGGTAGGGTGTCGAGGTCTTCAGAGG- 120110 Query 84 ACTATCGGC-TCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTGA-TGCCCTTAGA 141 ||| | || || ||| | |||| ||| || ||||||| |||| | ||| || | |||| Sbjct 120109 ACTGACAGCGTCTAGCTGTTGGAGGTTGGAAGCAATAATAGGTATATGAATGTCTCTAGA 120050 Query 142 TGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCACCTTGGCCGGA 201 ||| || |||||||| | ||||||| |||||| |||||||| ||||||||||| | Sbjct 120049 TGTCCTTGGCCGCACTAATGAAGCACTGACCGAGCCAGCGAGTTCAGCACCTTGGCCGAA 119990 Query 202 AGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTGCAATTATTGCT 261 || ||||||||||||| |||| | | |||| |||||| ||||||||||| ||||||| Sbjct 119989 CGGCTTGGGTAATCTTGTGAAACCCAGCCGTGTTGGGGACTGAGCATTGCAAGTATTGCT 119930 Query 262 CTT--CAACGAGGAA------TGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATTACG 313 ||| |||||||||| | | | |||| |||| || | |||| | ||| ||||| | Sbjct 119929 CTTCCCAACGAGGAATACATGTACGTGGTAAACGCGAGTAACCAGCTCACGTGGATTATG 119870 Query 314 TCCCTGCCCTTTGTA 328 | |||||| | |||| Sbjct 119869 TTCCTGCCATCTGTA 119855 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 947199479040