Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cryptococcus_20sp._20JCM_2024511_20[genbank_20GCA_5F001600855.1_2020 16-03-01] 55 sequences; 28,180,937 total letters Query= AAMG01002236.1 Length=287 Score E Sequences producing significant alignments: (Bits) Value seq18 136 6e-30 >seq18 Length=823183 Score = 136 bits (150), Expect = 6e-30 Identities = 132/166 (80%), Gaps = 3/166 (2%) Strand=Plus/Minus Query 20 ATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGTGCCGCGAAGCTACCATCTG 79 ||||||| |||||||| |||||| ||||| || | |||| || |||||||||| |||||| Sbjct 289 ATTCAGA-TAATTGGTATTTGCGCCTGTCCGATCGGGCAATGGCGCGAAGCTATCATCTG 231 Query 80 CTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCAGAACGGGGTGAT-TCTCTC 138 || ||||||||||||||||||||||||||||||| | | |||| | |||| | || Sbjct 230 CTAGATTATGGCTGAACGCCTCTAAGTCAGAATCTGTACTAGAA-ACGATGATGTTGGTC 172 Query 139 CTGCACATCGTAGTCGGATACGAATAGGCTTCGGCCCCGAACCTTA 184 | |||||| |||| | | |||||||||||||| ||||| || Sbjct 171 CCGCACATGTTAGTTGTGTTTGAATAGGCTTCGGCTGTGAACCATA 126 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 819199563520