Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cryptococcus_20sp._20JCM_2024511_20[genbank_20GCA_5F001600855.1_2020 16-03-01] 55 sequences; 28,180,937 total letters Query= NC_010671.1 Length=124279 Score E Sequences producing significant alignments: (Bits) Value seq14 273 2e-68 seq18 93.3 3e-14 >seq14 Length=977059 Score = 273 bits (302), Expect = 2e-68 Identities = 630/938 (67%), Gaps = 12/938 (1%) Strand=Plus/Minus Query 65993 ACAAACTTGGGAAGGGCAAGAGATGCGAGGTTGCAGACAGCTATCTCGTCAGGAGCGGTA 66052 |||||| ||| ||||| || || |||||||||||||| || | |||||| || || | Sbjct 768694 ACAAACGCGGGGAGGGCGAGCGAGGCGAGGTTGCAGACGGCGACCTCGTCGGGGGCAGAG 768635 Query 66053 TACTCGACAATTTCGGTGCACAGATTACTGCAGCGTATGGTGCCCAAATTCTGTTGATT- 66111 ||||||| || |||||||| || || | |||||||| | | ||| || || Sbjct 768634 TACTCGATGATCTCGGTGCAGAGGTTGGACGACTTGATGGTGCCGAGGTGCTGCTGGTTG 768575 Query 66112 -ACTCTTGCGATTGCATGCATCCTTGTACATCATGTACGGAGTGCCGGTCTCAACTTGGG 66170 ||| ||||| | || || |||||||| | |||| | || |||||||| |||| Sbjct 768574 GACT-TTGCGTTGGCG-GCGTCCTTGTAGAGCATGAAGGGGCCACCGGTCTCGGTCTGGG 768517 Query 66171 ACTCAATGATGGCGTGCCAAAGAGCGCGTGCCTTCACCGTACGTACCGCCCTACCTTTGC 66230 ||| | |||||| ||| || | ||||| | ||| | | | |||| | | Sbjct 768516 CCTCGAGGATGGCAAACCAGAGCTTCTGCGCCTTGATCGT-CTTGCGACCCTTGCCGGCC 768458 Query 66231 -GTTCGTAATGTTCGTAGAGGTGTTCGAAGGATTCACCCCATACTTCGGACAGACATGGA 66289 | ||||| |||||||| | || || || || || |||| || | || Sbjct 768457 TGCTCGTAGCTCTCGTAGAGCTTCTCAAACTGGTCGCCGTGCACGTCGGCGAGGCCGGGG 768398 Query 66290 CACTTGTGTGGACACATCAGCGACCAATCACCATCCTGTTCTACACGACGCATAAATAGA 66349 |||| | || ||||| |||| ||| || || || || || || ||| || || Sbjct 768397 CACTCGGCGGGGCACATGAGCGTCCAGTCGCCGTCGGCCTCGACGCGCTTCATGAAGAGG 768338 Query 66350 TCAGGTATCCAGAGGGCGTAGAAGAGATCGCGTGCTCGTTGCTCCTCAATGCCGTGATTT 66409 || | ||||||||||||||||| || || || || || ||||| ||||||| || Sbjct 768337 TCCGAGATCCAGAGGGCGTAGAACAGGTCACGGGCGCGGACTTCCTCCTTGCCGTGGTTC 768278 Query 66410 TTGCGCAAGTCGAGGAACTCAAAGATGTCGGCATGCCATGGTTCCAGGTAGATGGCGAAC 66469 || | | ||||||||| || ||||||||||| ||||| || || |||||||| || || Sbjct 768277 TTCCTGAGGTCGAGGAAGTCGAAGATGTCGGCGTGCCAAGGCTCGAGGTAGATCGCAAAG 768218 Query 66470 GAGCCCATACGTTTGCCGCCACCTTGGTCGACGTAGCGAGCGACATTGTTGAAGACACGC 66529 | || ||| ||| |||||| |||||||||||||| || || | | | || Sbjct 768217 GCACCGGGACGCTTGTTGCCACCCTGGTCGACGTAGCGGGCAGTGGCGTCGTACGCGCGG 768158 Query 66530 AACATCGGTACGAGCCCGTTAGATTTGCCATTGGTGCCGTCGATGGGGGATCCTCGTGCC 66589 | |||||| |||| ||||| || | || ||||| ||| ||||| ||| || || Sbjct 768157 AGCATCGGGACGATACCGTTCGAGTAACCGTTGGTACCGGCGATGTAGGAGCCCTTGGCG 768098 Query 66590 CGTATATCGTGAACATTCAGACCAATACCACCGGCCGTCTTCGAGATGGCAGCACAATCG 66649 || || | ||| | | ||||| ||||||||||| ||||| ||||| ||| || || Sbjct 768097 CGGATGTTGTGGATGTGAAGACCGATACCACCGGCGGTCTTTGAGATCTGAGCGCA--CG 768040 Query 66650 GC--CACTGTCCGGAATATGCCGTCAATGGAGTCACCCTTGATGGTCAGGAGGTAGCATG 66707 | | ||| | | || |||||||| ||||| || | |||| | |||| |||| | Sbjct 768039 TCTTGAGCGTCTCGTAGATCCCGTCAATCGAGTCGTCCCTCATGGCGACGAGGAAGCACG 767980 Query 66708 AACTAAGTTGGGGTTTGGGTGTGGCGGCCGAGAAGAGGGTGGGTGTAGCGTGCGTAAAGT 66767 | | ||||| ||||| ||| |||| |||||| ||||| | ||||| || |||| Sbjct 767979 ACGACATCTGGGGGTTGGGCGTGCCGGCGTTGAAGAGCGTGGGCGAGGCGTGAGTGAAGT 767920 Query 66768 AATGGCGAGACATGTAATTGTACGTCTCGATGACAGCATCAATGTTTTCGCCATGAATCC 66827 | | |||||| ||||||||||||||||| || ||||| || || || | Sbjct 767919 ATCGCTCCGACATGAGGTTGTACGTCTCGATGACCTTGTCGATGTTGGATCCGTGGATAC 767860 Query 66828 CGAGTGC-ACATCGCATCAGGAGGTATTGAGGCCGTTCGACCAGCCGATCCTTGATATGC 66886 ||| || ||| ||||| | | || || || || ||||| | | | ||||| | Sbjct 767859 CGACGGCGACA-CGCATGATCATGTGCTGGGGTCGCTCGACAATCTTGCCGTTGATGCGG 767801 Query 66887 ATTAAGTAGGAGCGTTCCAGGGTCTTGATACCAAAGTA 66924 | | ||| || || || || ||||||| |||||||| Sbjct 767800 AGGAGGTACGACCGCTCGAGCGTCTTGAAGCCAAAGTA 767763 >seq18 Length=823183 Score = 93.3 bits (102), Expect = 3e-14 Identities = 125/174 (72%), Gaps = 0/174 (0%) Strand=Plus/Minus Query 61738 GACGCTTTGCCCGTCTCACTCATCGGCATGAATTGTGGACTAATGTCGCAGTATATTGAA 61797 ||||| | |||||||| |||||||||||||| | || |||| || || || || Sbjct 29236 GACGCCCTCCCCGTCTCGCTCATCGGCATGAACTCCAAGCTCATGTGCCAATACATCGAG 29177 Query 61798 TTTGTTGCCGACCGTCTGTTGGTCGATTTGGGTATGAAGCGGATCTATAATACGAAAAAC 61857 ||||| |||||||||||| | |||| | || | | ||||| || | | ||| Sbjct 29176 TTTGTCGCCGACCGTCTGCTCGTCGCCCTCGGCAACGACAAGATCTGGAACGCCACCAAC 29117 Query 61858 CCATTTGATTTCATGGACATGATTTCGCTGGATGGCAAGACGAATTTTTTCGAG 61911 || || || |||||||| ||||| ||||| | |||||| |||| || |||||| Sbjct 29116 CCCTTCGACTTCATGGAGATGATCTCGCTCCAGGGCAAGGCGAACTTCTTCGAG 29063 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397567733505200