Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cryptococcus_20sp._20JCM_2024511_20[genbank_20GCA_5F001600855.1_2020 16-03-01] 55 sequences; 28,180,937 total letters Query= NC_027867.1 Length=651523 Score E Sequences producing significant alignments: (Bits) Value seq1 84.2 9e-11 >seq1 Length=2178591 Score = 84.2 bits (92), Expect = 9e-11 Identities = 157/229 (69%), Gaps = 4/229 (2%) Strand=Plus/Minus Query 89088 GGCGCCACCAAGGTCTACCTCGCTTCTTGCTCTCCCCCGATCCGTTACCCCAACGTGTAC 89147 ||||| | |||||| | |||| || ||| | ||||| ||||| | |||||| || ||| Sbjct 589524 GGCGCGAAAAAGGTCATCTTCGCCTCGTGCGCGCCCCCAATCCGCTTCCCCAATGTCTAC 589465 Query 89148 GGCATCGACATACCGTCGGCCAAGGAGCTCATTGCTTCTGGTCGCACCGAGCACGAGGTG 89207 ||||||||||| || ||| | |||||| | || || || ||| || || | Sbjct 589464 GGCATCGACATGCCCTCGAGGCACGAGCTCGTCGCGCACGGGCGGACCCAGGCGGAAATC 589405 Query 89208 GCTCTCCTCCTCGGAGCCGACCAGGTCATCTATCAGAGTGTCGACGACTT--GCAAGCGG 89265 || | |||| || |||| ||||||||| |||| |||| ||| | | || | Sbjct 589404 GCCCAGGAGATCGGCGCGGACCTGGTCATCTACCAGACCCTCGAGGACCTCGTCCAGAG- 589346 Query 89266 CCTGTCGCCAGTTCAATCCCTCCATCACGGCCTTTGAGGCCTCTGTCTT 89314 ||| || |||||||| || || ||| || |||||| ||| ||||| Sbjct 589345 -CTGCCGGCAGTTCAACCCGTCGATCCAGGAGTTTGAGTGCTCCGTCTT 589298 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 2084737695078890