Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cutaneotrichosporon_20cutaneum_20[genbank_20GCA_5F001613755.1_202016 -04-07] 21 sequences; 30,717,177 total letters Query= AAMG01000304.1 Length=683 Score E Sequences producing significant alignments: (Bits) Value seq1 116 2e-23 seq3 109 2e-21 >seq1 Length=6933627 Score = 116 bits (128), Expect = 2e-23 Identities = 101/125 (81%), Gaps = 4/125 (3%) Strand=Plus/Minus Query 379 TAGGATGCTGGCGTAATGGTTGTAAGCGGCCCGTCTTGGAACACGGACCAAGGAGTCTAA 438 ||||||| |||| |||||| | || || |||| |||||||||| ||||||| ||| ||| Sbjct 5608422 TAGGATGTTGGCATAATGGCTTCAAACGACCCGCCTTGGAACACAGACCAAGCAGTTTAA 5608363 Query 439 CATCTAT----GCGAGTGTTTGGGTGTCAAACCCGTGCGCGTAATGAAAGTGAACGGAGG 494 | | || ||||||||||| ||||||||| || ||||| |||||||||||||| ||| Sbjct 5608362 CGTAGATATCGGCGAGTGTTTGAGTGTCAAACTCGAGCGCGCAATGAAAGTGAACGTAGG 5608303 Query 495 TGGGA 499 |||| Sbjct 5608302 AGGGA 5608298 >seq3 Length=5629136 Score = 109 bits (120), Expect = 2e-21 Identities = 77/88 (88%), Gaps = 0/88 (0%) Strand=Plus/Minus Query 514 ACCATCGACCGATCCTGATGTCTTCGGATGGATTTGAGTAAGAGCATAGCTGTTGGGACC 573 ||| ||||||||| | ||||| | | | |||||||||||||||||||| | ||||||| Sbjct 3753526 ACCTTCGACCGATTCGGATGTTTACTGCTGGATTTGAGTAAGAGCATATAAGCTGGGACC 3753467 Query 574 CGAAAGATGGTGAACTATGCCTGAATAG 601 |||||||||||||||||||||||||||| Sbjct 3753466 CGAAAGATGGTGAACTATGCCTGAATAG 3753439 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 2079999549550