Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cutaneotrichosporon_20cutaneum_20[genbank_20GCA_5F001636075.1_202016 -05-02] 592 sequences; 38,696,417 total letters Query= AAMG01000304.1 Length=683 Score E Sequences producing significant alignments: (Bits) Value seq566 535 2e-149 >seq566 Length=2561 Score = 535 bits (592), Expect = 2e-149 Identities = 531/680 (78%), Gaps = 43/680 (6%) Strand=Plus/Minus Query 35 TCGACGAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTTCTAAAGC 94 || ||||||||||||||||||||||||||||| ||||||| |||||||| | |||||||| Sbjct 1163 TCTACGAGTCGAGTTGTTTGGGAATGCAGCTCAAAATGGGTGGTAAATTCCATCTAAAGC 1104 Query 95 TAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACTT 154 ||||||||||| |||||||||||||| ||||||| |||| |||||||||||||||||| Sbjct 1103 TAAATATTGGCGAGAGACCGATAGCGAACAAGTACCGTGAGGGAAAGATGAAAAGCACTT 1044 Query 155 TGGAAAGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGCGCTTGCAACCAGACTT 214 |||||||||||||||| || |||||||||||||||||||||| || ||| | ||| | | Sbjct 1043 TGGAAAGAGAGTTAAACAGTACGTGAAATTGTTGAAAGGGAAACGATTGAAGTCAGTCGT 984 Query 215 GCCCGCAGTTGC--TCAACCGGCCCCTCGGCCGGTGCACTCTTCTGCGGTCAGGCCAGCA 272 | | ||| ||| | | | || || ||| | | | | || || || Sbjct 983 GTTCT---TTGGATTCAGCTAGTTCTTCTA---GTCTACT-TCCATTGAACGGGTCAACA 931 Query 273 TCAGCTCGGGCGGTCGGATAAAGGCCCCGGGAATGTGGCCCCCTTCGGGGGGTGTTATAG 332 |||| | | | | |||||||| || |||| || ||| | ||| ||||||||| Sbjct 930 TCAGTTTTGTCCGGTGGATAAAGATAGTAGGCATGTAGCTCCC--CCGGGAGTGTTATAG 873 Query 333 CC--------------CGGGGTG--------GAATGCGGCCCGCCT---GGACTGAGGTC 367 | | ||||| || ||| || ||||| || | | || Sbjct 872 ACTATTATTGCATACACTGGGTGAGACTGAGGACTGCAGCTCGCCTTTTGGCCGGTCTTC 813 Query 368 CG---CGCTCCGGCT-AGGATGCTGGCGTAATGGTTGTAAGCGGCCCGTCTTGGAACACG 423 | || || ||| |||||| || | |||||| | ||| || ||||||||| |||||| Sbjct 812 GGACACGTTCGAGCTTAGGATGTTGACATAATGGCTTTAAACGACCCGTCTTGAAACACG 753 Query 424 GACCAAGGAGTCTAACATCTATGCGAGTGTTTGGGTGTCAAACCCGTGCGCGTAATGAAA 483 |||||||||||||||||| | |||||||||||| ||||||||| || ||||||||||||| Sbjct 752 GACCAAGGAGTCTAACATATCTGCGAGTGTTTGAGTGTCAAACTCGAGCGCGTAATGAAA 693 Query 484 GTGAACGGAGGTGGGAACCCGTGAGGGTGCACCATCGACCGATCCTGATGTCTTCGGATG 543 |||||| | || |||| || || ||| ||||| ||||||||||| ||||| | | |||| Sbjct 692 GTGAACTG-GGAGGGATCC-GTAAGGA-GCACCTTCGACCGATCCGGATGTTTACTGATG 636 Query 544 GATTTGAGTAAGAGCATAGCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGG 603 |||||||||||||||||| || ||||||||||||||||||||||||||||||||||||| Sbjct 635 GATTTGAGTAAGAGCATATATGCTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGG 576 Query 604 TGAAGCCAGAGGAAACTCTGGTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTC 663 |||||||| ||||||||||||||||||||| |||| ||||| ||||||||||||||||| Sbjct 575 CGAAGCCAGGGGAAACTCTGGTGGAGGCTCGTAGCGATTCTGACGTGCAAATCGATCGTC 516 Query 664 AAATTTGGGTATAGGGGCGA 683 |||||||||||||||||||| Sbjct 515 AAATTTGGGTATAGGGGCGA 496 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 2079987301600