Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cutaneotrichosporon_20cutaneum_20[genbank_20GCA_5F001636075.1_202016 -05-02] 592 sequences; 38,696,417 total letters Query= NC_027867.1 Length=651523 Score E Sequences producing significant alignments: (Bits) Value seq77 118 4e-21 seq36 98.7 4e-15 seq29 89.7 2e-12 seq32 86.0 3e-11 >seq77 Length=142565 Score = 118 bits (130), Expect = 4e-21 Identities = 187/263 (71%), Gaps = 4/263 (2%) Strand=Plus/Plus Query 89025 GTGGACGACTCTGTCGTGCGCGGCACCACATCCAAGTTCATAATCGACCTC-CTTCGCAA 89083 || |||||||| |||| || |||||||| |||||| || || | | | | | Sbjct 67992 GTTGACGACTCGATCGTCCGTGGCACCACCTCCAAGGAGATTGTCCAGATGGCCAAGGAC 68051 Query 89084 GTCTGGCGCCACCAAGGTCTACCTCGCTTCTTGCTCTCCCCCGATCCGTTACCCCAACGT 89143 || |||||||| |||||| | |||| || | ||||||| ||||| | | ||||||| Sbjct 68052 GT-TGGCGCCAAGAAGGTCATCTTCGCCTCGGCCGCTCCCCCCATCCGCTTCTCCAACGT 68110 Query 89144 GTACGGCATCGACATACCGTCGGCCAAGGAGCTCATTGCTTCTGGTCGCACCGAGC-ACG 89202 ||||| |||||||| || ||| || |||||||| | || | ||| || || || | | | Sbjct 68111 CTACGGTATCGACATGCCCTCGCCCCAGGAGCTCGTCGCATATGGCCGTAC-GACCGAGG 68169 Query 89203 AGGTGGCTCTCCTCCTCGGAGCCGACCAGGTCATCTATCAGAGTGTCGACGACTTGCAAG 89262 |||| || | | | || ||||||| |||||||| |||| |||||||| || Sbjct 68170 AGGTTGCCGAGCACATTGGCGCCGACCTTGTCATCTACCAGAAGCTCGACGACCTGGTCC 68229 Query 89263 CGGCCTGTCGCCAGTTCAATCCC 89285 | |||| ||||||||||| ||| Sbjct 68230 AGTCCTGCCGCCAGTTCAACCCC 68252 >seq36 Length=194512 Score = 98.7 bits (108), Expect = 4e-15 Identities = 194/283 (69%), Gaps = 8/283 (3%) Strand=Plus/Plus Query 89007 GACAAGGCCGTGGTCGTGGTGGACGACTCTGTCGTGCGCGGCACCACATCCAAGTTCATA 89066 |||||| | || | | || |||||||| |||| || || ||||| |||||| || Sbjct 145015 GACAAGACAGTTCTTCTCGTTGACGACTCCATCGTCCGTGGTACCACCTCCAAGGAGATC 145074 Query 89067 ATCGACCTC-CTTCGCAAGTCTGGCGCCACCAAGGTCTACCTCGCTTCTTGCTCTCCCCC 89125 | | | | | | ||| ||||||| |||||| | |||| || | ||||||| Sbjct 145075 GTTCAGATGGCCAAGGACGTC-GGCGCCAAGAAGGTCATCTTCGCCTCGGCCGCTCCCCC 145133 Query 89126 GATCCGTTACCCCAACGTGTACGGCATCGACATACCGTCGGCCAAGGAGCTCATTGCTTC 89185 ||||| | | ||||||| |||||||| ||||| || ||| || | |||||| | || | Sbjct 145134 CATCCGCTTCTCCAACGTCTACGGCATTGACATGCCCTCGCCCCATGAGCTCGTGGCGTA 145193 Query 89186 TGGTCG---CACCGAGCACGAGGTGGCTCTCCTCCTCGGAGCCGACCAGGTCATCTATCA 89242 || || ||||||| ||||| ||| | | | || ||||||| |||||||| || Sbjct 145194 CGGCCGTACCACCGAG---GAGGTCGCTGAGCACATTGGTGCCGACCTCGTCATCTACCA 145250 Query 89243 GAGTGTCGACGACTTGCAAGCGGCCTGTCGCCAGTTCAATCCC 89285 || |||||||| | | | || ||||||||||| ||| Sbjct 145251 GAAGCTCGACGACCTCGTCCAGTCTTGCCGCCAGTTCAACCCC 145293 >seq29 Length=201970 Score = 89.7 bits (98), Expect = 2e-12 Identities = 88/114 (77%), Gaps = 0/114 (0%) Strand=Plus/Minus Query 349073 GCGTCGAGAATCTCCTTGAGTCTGGGCATGCCCAGGGTCACGTTCTTGGCCGCGACGCCG 349132 |||| || ||||||||||| | |||| || || || |||||| | | |||||| ||| Sbjct 27110 GCGTTGATAATCTCCTTGATACGCGGCACACCGAGAGTGACGTTCATCGACGCGACACCG 27051 Query 349133 GCAAAGTGGAAGGTCTGGAGGGTCAACTGCGTGAGGGGCTCGCCGATGCACTGG 349186 || ||||||||||||| ||| |||| |||||| |||||| || || ||||| Sbjct 27050 GCGAAGTGGAAGGTCTTGAGCGTCATCTGCGTACCGGGCTCACCAATCGACTGG 26997 >seq32 Length=199864 Score = 86.0 bits (94), Expect = 3e-11 Identities = 88/115 (77%), Gaps = 0/115 (0%) Strand=Plus/Plus Query 349072 GGCGTCGAGAATCTCCTTGAGTCTGGGCATGCCCAGGGTCACGTTCTTGGCCGCGACGCC 349131 ||||| || ||||||||||| | |||| || ||||| |||||| | | ||||| || Sbjct 86133 GGCGTTGATAATCTCCTTGATACGAGGCACACCGAGGGTGACGTTCATTGAGGCGACACC 86192 Query 349132 GGCAAAGTGGAAGGTCTGGAGGGTCAACTGCGTGAGGGGCTCGCCGATGCACTGG 349186 || |||||||| |||| ||| |||| |||||| |||||| ||||| ||||| Sbjct 86193 AGCGAAGTGGAATGTCTTGAGCGTCATCTGCGTTCCGGGCTCACCGATCGACTGG 86247 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 2084723001576416