Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cutaneotrichosporon_20guehoae_20[genbank_20GCA_5F001600415.1_202016- 03-01] 35 sequences; 33,698,914 total letters Query= AAMG01002199.1 Length=543 Score E Sequences producing significant alignments: (Bits) Value seq13 343 5e-92 seq23 134 5e-29 seq1 75.2 4e-11 >seq13 Length=1122195 Score = 343 bits (380), Expect = 5e-92 Identities = 205/215 (95%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 329 CCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGGACAGTGGGAATCTCGTTAA 388 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1087744 CCTGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGGACAGTGGGAATCTCGTTAA 1087685 Query 389 TCCATTCATGCGCGTCACTAATTAGATGACGAGGCATTTGGCTACCTTAAGAGAGTCATA 448 ||||| |||||||||||| ||||||||||||||||||||||||||| ||||||||||||| Sbjct 1087684 TCCATCCATGCGCGTCACCAATTAGATGACGAGGCATTTGGCTACCATAAGAGAGTCATA 1087625 Query 449 GTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTCTTCACTTTGACATTCAGAGCACT 508 ||||||||||||| ||||| |||||||| ||||||||||||||||||||||||||||||| Sbjct 1087624 GTTACTCCCGCCGGTTACCTGCGCTTGGCTGAATTTCTTCACTTTGACATTCAGAGCACT 1087565 Query 509 GGGCAGAAATCACATTGCGTCAACATCACTTTCTG 543 ||||||||||||||||| ||||||| || |||||| Sbjct 1087564 GGGCAGAAATCACATTGTGTCAACACCATTTTCTG 1087530 >seq23 Length=297083 Score = 134 bits (148), Expect = 5e-29 Identities = 133/171 (78%), Gaps = 6/171 (4%) Strand=Plus/Plus Query 190 AGTaaaaaaaCGATAAGGGTAGTGGTATTTCACTTGCGCCGAAACGGCTCCCACTTATTC 249 ||||||| ||| | |||||||||||||||| |||| || ||| || || | || Sbjct 144445 AGTAAAAGAACCGTGGAGGTAGTGGTATTTCACCCCCGCCAAA---GCTGCCGCTCACTC 144501 Query 250 TACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAACAGGGTCTTCTTT 309 ||| | || ||| ||||||| || ||| ||||||||||||||| || ||||||| Sbjct 144502 TACCC---TCGTGTCTATTCACAATCTCAAACTCGAGTCAAGCTCAACATGGGCTTCTTT 144558 Query 310 CCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAG 360 ||| |||||| | |||||| ||||||||||||||||||||||| |||| || Sbjct 144559 CCCAGCTGATGCAGCCAAGGCCGTTCCCTTGGCTGTGGTTTCGTTAGAAAG 144609 >seq1 Length=3969531 Score = 75.2 bits (82), Expect = 4e-11 Identities = 80/106 (75%), Gaps = 0/106 (0%) Strand=Plus/Plus Query 92 AAACTCCCCACCTGACAATGTCATCAACCCGGATCGGCCCGCGAAGGACCTTAACGCCAG 151 |||||| || ||| ||||||| ||||||| |||| || | ||||||||||| |||| Sbjct 2064894 AAACTCGACATCTGTCAATGTCGTCAACCCCGATCAACCGGTAAAGGACCTTAAAGCCAA 2064953 Query 152 AAAATGGTCGGTGAAGACCAGTTCCGCTTCATTGATTAAGTaaaaa 197 || || || || ||| ||||||||||||| ||||| |||| Sbjct 2064954 AAGGTGTGACGTCAATCTCAGCTCCGCTTCATTGAATAAGTTAAAA 2064999 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1635199427680