Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cystobasidiopsis_20lactophilus_20[genbank_20GCA_5F001599975.1_202016 -03-01] 19 sequences; 22,180,604 total letters Query= NC_010671.1 Length=124279 Score E Sequences producing significant alignments: (Bits) Value seq1 116 3e-21 >seq1 Length=5326569 Score = 116 bits (128), Expect = 3e-21 Identities = 141/192 (73%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 66445 CCATGGTTCCAGGTAGATGGCGAACGAGCCCATACGTTTGCCGCCACCTTGGTCGACGTA 66504 |||||| || |||||||||||||| | || || ||| |||||||||||| ||||| Sbjct 1974122 CCATGGCTCGAGGTAGATGGCGAAAGCACCGGGGCGCTTGTTGCCACCTTGGTCAACGTA 1974063 Query 66505 GCGAGCGACATTGTTGAAGACACGCAACATCGGTACGAGCCCGTTAGATTTGCCATTGGT 66564 ||| || |||||||| || || | ||| || |||| ||||| || | ||| ||||| Sbjct 1974062 GCGGGCCGTGTTGTTGAACACGCGGAGCATGGGCACGACGCCGTTCGAGTAGCCGTTGGT 1974003 Query 66565 GCCGTCGATGGGGGATCCTCGTGCCCGTATATCGTGAACATTCAGACCAATACCACCGGC 66624 |||| ||||| ||| || || || || | ||| | | || ||||| ||||| || Sbjct 1974002 GCCGCCGATGTAGGAGCCAGTGGCGCGGATGTTGTGGATGTGGAGGCCAATGCCACCAGC 1973943 Query 66625 CGTCTTCGAGAT 66636 |||||| ||||| Sbjct 1973942 CGTCTTGGAGAT 1973931 Score = 93.3 bits (102), Expect = 3e-14 Identities = 89/114 (78%), Gaps = 0/114 (0%) Strand=Plus/Minus Query 65812 GTCGGCCAGACCTTGAACTCCAATACCGATGGGACGATGACGCAAATTGGAACGTCTCGC 65871 |||||| ||||||||||| |||| |||||||| || || |||| || || | || Sbjct 1974908 GTCGGCGAGACCTTGAACACCAACGCCGATGGGTCGGTGCCGCATGTTCGAGTTCTTGGC 1974849 Query 65872 CTCAGGTACAGGGTAGTAATTGATATCGATAATGCGATTCAAATTGCGTGTCAC 65925 ||| | ||||||||||| |||| |||||||||||| ||||| ||||| || || Sbjct 1974848 CTCTTGAACAGGGTAGTAGTTGACATCGATAATGCGGTTCAAGTTGCGGGTGAC 1974795 Score = 86.0 bits (94), Expect = 5e-12 Identities = 91/120 (76%), Gaps = 0/120 (0%) Strand=Plus/Minus Query 66329 TCTACACGACGCATAAATAGATCAGGTATCCAGAGGGCGTAGAAGAGATCGCGTGCTCGT 66388 || || || ||||| || | || | |||||||||||||||||||| || || || || Sbjct 1974298 TCGACGCGGCGCATGAACATGTCCGAGATCCAGAGGGCGTAGAAGAGGTCACGAGCGCGA 1974239 Query 66389 TGCTCCTCAATGCCGTGATTTTTGCGCAAGTCGAGGAACTCAAAGATGTCGGCATGCCAT 66448 ||||| ||||||| || ||||||||||| | | ||| ||||||||||| ||| || Sbjct 1974238 ACTTCCTCCTTGCCGTGGTTCTTGCGCAAGTCAATCAGCTCGAAGATGTCGGCGTGCTAT 1974179 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397567907938160