Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cystobasidium_20pallidum_20[genbank_20GCA_5F001599955.1_202016-03- 01] 69 sequences; 21,721,408 total letters Query= NC_010671.1 Length=124279 Score E Sequences producing significant alignments: (Bits) Value seq5 120 2e-22 >seq5 Length=1549313 Score = 120 bits (132), Expect = 2e-22 Identities = 173/244 (71%), Gaps = 0/244 (0%) Strand=Plus/Minus Query 66299 GGACACATCAGCGACCAATCACCATCCTGTTCTACACGACGCATAAATAGATCAGGTATC 66358 ||||| | || | ||| ||||| | ||| || || || ||||| || | || || ||| Sbjct 643721 GGACAGAAAAGAGGCCAGTCACCGTTCTGCTCGACTCGTCGCATGAACATGTCTGGAATC 643662 Query 66359 CAGAGGGCGTAGAAGAGATCGCGTGCTCGTTGCTCCTCAATGCCGTGATTTTTGCGCAAG 66418 || || || |||| || || | |||| || || | |||||||| ||||| | Sbjct 643661 CAAAGAGCAAAGAAAAGGTCTCTAGCTCTGACTTCTTCTTTTCCGTGATTCTTGCGGAGA 643602 Query 66419 TCGAGGAACTCAAAGATGTCGGCATGCCATGGTTCCAGGTAGATGGCGAACGAGCCCATA 66478 || ||||| |||||||| || ||||||||||| || | |||||| || || | || Sbjct 643601 TCAAGGAAGTCAAAGATATCTGCATGCCATGGCTCGATGTAGATAGCAAAGGCACCAGGT 643542 Query 66479 CGTTTGCCGCCACCTTGGTCGACGTAGCGAGCGACATTGTTGAAGACACGCAACATCGGT 66538 || ||| |||||| || || || || || || ||||||||| || |||| ||||||| Sbjct 643541 CGCTTGTTGCCACCCTGATCAACATAACGCGCAGTATTGTTGAAAACTCGCAGCATCGGT 643482 Query 66539 ACGA 66542 |||| Sbjct 643481 ACGA 643478 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397567665670160