Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cystobasidium_20pallidum_20[genbank_20GCA_5F001599955.1_202016-03- 01] 69 sequences; 21,721,408 total letters Query= NC_031927.1 Length=216121 Score E Sequences producing significant alignments: (Bits) Value seq16 89.7 7e-13 >seq16 Length=487666 Score = 89.7 bits (98), Expect = 7e-13 Identities = 209/313 (67%), Gaps = 2/313 (1%) Strand=Plus/Minus Query 162475 GAGCTTTATGGGCTAGTTCAGGAGACACCCCAGAAAGAAACCACTCCAATGTATCCACGA 162534 ||||| || || ||| ||||| | || || | |||| || || | || || || Sbjct 197605 GAGCTGTACGGCAAAGTACAGGAAATCCCGCAAAGCGAAAAGACACCCTTCTACCCTCGC 197546 Query 162535 TCCCCTTATGGAGTTGCTAAACTATATGGGTTCTGGATCATCAAAAACTACAGGGAAAGC 162594 || || || || || || || ||||| | | |||||| ||||||| ||| | || Sbjct 197545 TCTCCCTACGGTGTAGCGAAGCTATACGCCTACTGGATAGTCAAAAATTACCGCGAGTCT 197486 Query 162595 TATGACATACATGCCTCTAGCGGTATTCTATTCAATCACGAAAGCTCACGCAGA-GGAGA 162653 |||| || || || |||| || ||||| |||||||||||| || | ||| ||||| Sbjct 197485 TATGGTATGCACGCATCTAATGGAATTCTTTTCAATCACGAATCGCCAAGAAGAGGGAGA 197426 Query 162654 GACGTTCGTCACACGCAAGATCGTCCGAGCCTTGTCCCGAATTAGTGTGGGACTCCAAAG 162713 || |||||||| || || || || ||| || || ||| |||| | || Sbjct 197425 -ACATTCGTCACGCGTAAAATAACGCGGGCCGTGGCCGAAATCTCGATGGGTGTTCAGGA 197367 Query 162714 TGATCTACAACTTGGAAACCTCAATGCCCGACGTGACTGGGGACACGCCAAAGACTACGT 162773 | ||| | || || ||||| |||| |||||||||||||| || | |||||| || Sbjct 197366 TTGTCTTTACCTGGGGAACCTGGATGCGATGCGTGACTGGGGACATGCTAGAGACTATGT 197307 Query 162774 AGAGGCTATGTGG 162786 || | |||||| Sbjct 197306 TGAAGGAATGTGG 197294 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 691458603616440