Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dioszegia_20aurantiaca_20[genbank_20GCA_5F001600655.1_202016-03-01] 52 sequences; 19,344,119 total letters Query= NC_010671.1 Length=124279 Score E Sequences producing significant alignments: (Bits) Value seq9 257 1e-63 seq1 89.7 4e-13 >seq9 Length=941136 Score = 257 bits (284), Expect = 1e-63 Identities = 623/932 (67%), Gaps = 16/932 (2%) Strand=Plus/Plus Query 66001 gggAAGGGCAAGAGATGCGAGGTTGCAGACAGCTATCTCGTCAGGAGCGGTATACTCGAC 66060 ||| ||||| || || || || || |||||||| | ||||||||| || | ||||||| Sbjct 164834 GGGGAGGGCGAGGGAGGCAAGATTACAGACAGCAACCTCGTCAGGCGCAGAGTACTCGAT 164893 Query 66061 AATTTCGGTGCACAGATTACTGCAGCGTATGGTGCCCAAATTCTGTTGATTACTCTTG-C 66119 ||| ||||| || || || | | || || || | || || || || ||| | Sbjct 164894 AATCTCGGTACAAAGGTTGGAGGATTTAATCGTACCGAGATGTTGCTGGTTCGATTTGGC 164953 Query 66120 GATTGCATGCATCCTTGTACATCATGTACGGAGTGCCGGTCTCAACTTGGGACTCAATGA 66179 | | ||| || |||||||| | |||| | ||| ||| ||||| || | ||| | || Sbjct 164954 GTTCGCA-GCGTCCTTGTAGAGCATGAAGGGACCGCCAGTCTCGGTCTGAGCCTCGAGGA 165012 Query 66180 TGGCGTGCCAAAGAGCGCGTGCCTTCACCGTACGTACCGCCCTACCTTTGCGT-TCGTAA 66238 ||||| ||| || | || || | || | | | |||| || | | ||||| Sbjct 165013 TGGCGAACCAGAGCTTCTGAGCTTTGATGGT-CTTTCGCCCCTTCCCAGCCTTCTCGTAC 165071 Query 66239 TGTTCGTAGAGGTGTTCGAAGGATTCACCCCAT--ACTTCGGACAGACATGGACACT-TG 66295 ||||| || ||||| ||| || | || |||| |||| || |||| || Sbjct 165072 GACTCGTACAGCGCCTCGAAC--TTCTCCGAGTGAACATCGGCGAGACCGGGGCACTCTG 165129 Query 66296 TGTGGACACATCAGCGACCAATCACCATCCTGTTCTACACGACGCATAAATAGATCAGGT 66355 | |||||||| || | ||| ||||| ||| || ||||| ||| || || || | Sbjct 165130 CG-GGACACATGAGGGTCCAGTCACCGTCCGACTCGACACGCTTCATGAAGAGGTCGGAG 165188 Query 66356 ATCCAGAGGGCGTAGAAGAGATCGCGTGCTCGTTGCTCCTCAATGCCGTGATTTTTGCGC 66415 ||||||||||||||||| || || || || || ||| || | ||||| || || | | Sbjct 165189 ATCCAGAGGGCGTAGAACAGGTCCCGAGCACGGACCTCTTCTTTACCGTGGTTCTTCCTC 165248 Query 66416 AAGTCGAGGAACTCAAAGATGTCGGCATGCCATGGTTCCAGGTAGATGGCGAACGAGCCC 66475 |||||||||||||| ||||||||||| ||||| || || |||||||||||||||| ||| Sbjct 165249 AAGTCGAGGAACTCGAAGATGTCGGCGTGCCAGGGCTCGAGGTAGATGGCGAACGCACCC 165308 Query 66476 ATACGTTTGCCGCCACCTTGGTCGACGTAGCGAGCGACATTGTTGAAGACACGCAACATC 66535 || ||| |||||||||||||| || || || || ||| | || | ||| Sbjct 165309 GGTCGCTTGTTTCCACCTTGGTCGACATATCGCGCCGTGGCGTCAAAGGCGCGGAGCATG 165368 Query 66536 GGTACGAGCCCGTTAGATTTGCCATTGGTGCCGTCGATGGGGGATCCTCGTGCCCGTATA 66595 || |||| ||||| || | || ||||| ||| | || || || || || | Sbjct 165369 GGAACGATACCGTTCGAGTAACCGTTGGTACCGGCAATATACGAGCCCTTAGCGCGGACG 165428 Query 66596 TCGTGAACATTCAGACCAATACCACCGGCCGTCTTCGAGATGGCAGCACAATCGGCC--- 66652 | ||| | | || || || || ||||| ||||| ||||| || || || | Sbjct 165429 TTGTGGATGTGGAGTCCGATTCCTCCGGCAGTCTTGGAGATCTGCGCGCA---GGTCTTG 165485 Query 66653 ACTGTCCGGAATATGCCGTCAATGGAGTCACCCTTGATGGTCAGGAGGTAGCATGAACTA 66712 | ||| | | || || ||||| ||||| |||| |||| | ||| |||| || Sbjct 165486 AGGGTCTCGTAGATCCCCTCAATCGAGTCGTCCTTCATGGCGACAAGGAAGCAGGATGAC 165545 Query 66713 AGTTGGGGTTTGGGTGTGGCGGCCGAGAAGAGGGTGGGTGTAGCGTGCGTAAAGTAATGG 66772 | |||||| ||||| || |||| ||||||||| || | ||||| || ||||| | Sbjct 165546 ATTTGGGGGTTGGGGGTACCGGCGTTGAAGAGGGTAGGGGAGGCGTGGGTGAAGTATCGC 165605 Query 66773 CGAGACATGTAATTGTACGTCTCGATGACAGCATCAATGTTTTCGCCATGAATCCCGAGT 66832 ||||||| |||||| ||||| ||||| |||||||| | || || || |||| Sbjct 165606 TCAGACATGAGATTGTAAGTCTCAATGACCTTGTCAATGTTGGCACCGTGGATACCGACG 165665 Query 66833 GCACATCGCATCAGGAGGTATTGAGGCCGTTCGACCAGCCGATCCTTGATATGCATTAAG 66892 ||| ||||| | | || || || |||||||| | | | |||| | | | | Sbjct 165666 GCAACACGCATGATCATGTGCTGGGGACGTTCGACGATTTTACCGTTGACGCGAAGGAGG 165725 Query 66893 TAGGAGCGTTCCAGGGTCTTGATACCAAAGTA 66924 ||||| || || ||||| |||| ||||||||| Sbjct 165726 TAGGATCGCTCGAGGGTTTTGAAACCAAAGTA 165757 >seq1 Length=4122216 Score = 89.7 bits (98), Expect = 4e-13 Identities = 204/302 (68%), Gaps = 4/302 (1%) Strand=Plus/Plus Query 61320 CATGGAGAATGTCCACTCGGAGATGTACAGTGTTCTCATCGATACGTACATCAGGGAGCG 61379 || ||||||| ||||||| |||| ||| | || || || || ||||||| ||| | Sbjct 3090095 CAGGGAGAATATCCACTCCGAGACCTACTCCCTCCTTATTGACACCTACATCAAGGACCC 3090154 Query 61380 GGCGGAACGTGAACGAT-TGTTCAATGCCATCGAGACGATACCGGCGGTGAAGCGGAAAG 61438 || || || | | | || | |||||||| || || || | ||| ||| | Sbjct 3090155 CGCTCGCCG-GACCTACCTCTTTGACGCCATCGACACCATCCCCTGCATCAAGAAGAAGG 3090213 Query 61439 CGGATTGGGCCTTCAATTGGATCACC-AGTACAACGGCTACATTTGGTGAACGATTGCTG 61497 | || ||||| | || ||||| || | | || | | || || | || || | | Sbjct 3090214 CCGACTGGGCGCTGAAGTGGATTACAGACGAGAA-GTCCACCTTCGCCGAGCGCCTCATC 3090272 Query 61498 GCATTTGCGGTGGTCGAGGGTGTATTTTTCAGTGGATCGTTTGCCGCAATCTTTTGGTTG 61557 || ||||| | ||||||||| | || ||| || || || ||| | ||||| ||| | Sbjct 3090273 GCCTTTGCCGCCGTCGAGGGTATCTTCTTCTCCGGCTCCTTCGCCTCCATCTTCTGGCTC 3090332 Query 61558 AAGAAACGTGGACTTATGCCCGGTCTGACCTTCAGCAATGAGTTGATATCACGCGACGAG 61617 ||||| |||||||| ||||||||||| |||||| ||| ||| | || || || || ||| Sbjct 3090333 AAGAAGCGTGGACTCATGCCCGGTCTCACCTTCTCCAACGAGCTCATCTCCCGTGATGAG 3090392 Query 61618 GG 61619 || Sbjct 3090393 GG 3090394 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397567748041280