Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dioszegia_20crocea_20[genbank_20GCA_5F001600615.1_202016-03-01] 26 sequences; 20,595,339 total letters Query= NC_010671.1 Length=124279 Score E Sequences producing significant alignments: (Bits) Value seq2 295 5e-75 >seq2 Length=3428829 Score = 295 bits (326), Expect = 5e-75 Identities = 631/931 (68%), Gaps = 14/931 (2%) Strand=Plus/Plus Query 66001 GGGAAGGGCAAGAGATGCGAGGTTGCAGACAGCTATCTCGTCAGGAGCGGTATACTCGAC 66060 ||| ||||| || || || |||||||| ||||| | |||||| || || | ||||||| Sbjct 3422253 GGGGAGGGCGAGGGAGGCAAGGTTGCAAACAGCAACCTCGTCGGGGGCAGAGTACTCGAT 3422312 Query 66061 AATTTCGGTGCACAGATTACTGCAGCGTATGGTGCCCAAATTCTGTTGATTACTCTTG-C 66119 ||| ||||| || ||||| | | || || || | | |||||| || |||| | Sbjct 3422313 AATCTCGGTACAGAGATTGGAGGATTTGATCGTACCGAGGTGCTGTTGGTTCGACTTGGC 3422372 Query 66120 GATTGCATGCATCCTTGTACATCATGTACGGAGTGCCGGTCTCAACTTGGGACTCAATGA 66179 | | || || |||||||| | |||| | ||| || ||||| ||| | ||||| | Sbjct 3422373 GTTCGCC-GCGTCCTTGTAGAGCATGAAGGGACCACCCGTCTCGGTTTGAGCCTCAAGAA 3422431 Query 66180 TGGCGTGCCAAAGAGCGCGTGCCTTCACCGTACGTACCGCCCTACCTTTGCGT-TCGTAA 66238 |||| ||| || | ||||| | || | | | |||| | | | ||||| Sbjct 3422432 TGGCAAACCAGAGCTTCTGGGCCTTAATGGT-CTTTCGACCCTTGCCAGCCTTCTCGTAC 3422490 Query 66239 TGTTCGTAGAGGTGTTCGAAGGATTCACCCCAT--ACTTCGGACAGACATGGACACTTGT 66296 |||||||| || ||||| ||| || | || |||| |||| || |||| | Sbjct 3422491 GACTCGTAGAGCTGCTCGAAC--TTCTCCGAGTGGACATCGGCAAGACCGGGGCACTCGG 3422548 Query 66297 GTGGACACATCAGCGACCAATCACCATCCTGTTCTACACGACGCATAAATAGATCAGGTA 66356 || ||||| || | ||| || || ||| || || || ||| || || || | | Sbjct 3422549 CAGGGCACATGAGTGTCCACTCGCCGTCCGACTCGACCCGCTTCATGAAGAGGTCCGAGA 3422608 Query 66357 TCCAGAGGGCGTAGAAGAGATCGCGTGCTCGTTGCTCCTCAATGCCGTGATTTTTGCGCA 66416 ||||||||||||||||||| || ||||| || |||||| | ||||| || ||||||| Sbjct 3422609 TCCAGAGGGCGTAGAAGAGGTCACGTGCACGGACCTCCTCCTTACCGTGGTTCTTGCGCA 3422668 Query 66417 AGTCGAGGAACTCAAAGATGTCGGCATGCCATGGTTCCAGGTAGATGGCGAACGAGCCCA 66476 |||||||||||| ||||||||||| ||||| || || ||||||||||| |||| |||| Sbjct 3422669 GGTCGAGGAACTCGAAGATGTCGGCGTGCCAGGGCTCGAGGTAGATGGCAAACGCGCCCG 3422728 Query 66477 TACGTTTGCCGCCACCTTGGTCGACGTAGCGAGCGACATTGTTGAAGACACGCAACATCG 66536 ||||||| || || ||||||||||| || || || ||| | || | ||| | Sbjct 3422729 GACGTTTGTTACCGCCCTGGTCGACGTATCGCGCCGTGGCGTCGAACGCTCGGAGCATGG 3422788 Query 66537 GTACGAGCCCGTTAGATTTGCCATTGGTGCCGTCGATGGGGGATCCTCGTGCCCGTATAT 66596 |||||| ||||| || | || ||||| ||| | ||| ||||| || || | || Sbjct 3422789 GTACGATACCGTTCGAGTACCCGTTGGTACCGGCAATGTAAGATCCCTTGGCGCGGACAT 3422848 Query 66597 CGTGAACATTCAGACCAATACCACCGGCCGTCTTCGAGATGGCAGCACAATCGGC--CAC 66654 ||| | | || || || || || || ||||| ||||| | || | || | | Sbjct 3422849 TGTGGATGTGGAGTCCGATCCCGCCTGCAGTCTTGGAGAT--CTGCGCGCACGTCTTGAG 3422906 Query 66655 TGTCCGGAATATGCCGTCAATGGAGTCACCCTTGATGGTCAGGAGGTAGCATGAACTAAG 66714 ||| | || || ||||| ||||| |||| || | || |||| |||| || | Sbjct 3422907 GGTCTCATAGATACCCTCAATCGAGTCGTCCTTCATCGCCACGAGGAAGCAGGATGACAT 3422966 Query 66715 TTGGGGTTTGGGTGTGGCGGCCGAGAAGAGGGTGGGTGTAGCGTGCGTAAAGTAATGGCG 66774 |||||| ||||| || |||| ||||||||| || | |||||| || ||||| | Sbjct 3422967 TTGGGGGTTGGGGGTACCGGCGTTGAAGAGGGTAGGGGAAGCGTGGGTGAAGTATCGCTC 3423026 Query 66775 AGACATGTAATTGTACGTCTCGATGACAGCATCAATGTTTTCGCCATGAATCCCGAGTGC 66834 ||||||| ||||| ||||| ||||| |||||||| | || || || |||| || Sbjct 3423027 AGACATGAGGTTGTAGGTCTCAATGACCTTGTCAATGTTGGCACCGTGGATACCGACAGC 3423086 Query 66835 -ACATCGCATCAGGAGGTATTGAGGCCGTTCGACCAGCCGATCCTTGATATGCATTAAGT 66893 ||| ||||| | | || || || || ||||| | | | |||| | | | || Sbjct 3423087 GACA-CGCATAATCATGTGCTGGGGACGCTCGACGATTTTACCGTTGACGCGAAGGAGGT 3423145 Query 66894 AGGAGCGTTCCAGGGTCTTGATACCAAAGTA 66924 |||| || || |||||||||| |||||||| Sbjct 3423146 AGGATCGCTCGAGGGTCTTGAACCCAAAGTA 3423176 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397567874020640