Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dioszegia_20crocea_20[genbank_20GCA_5F001600615.1_202016-03-01] 26 sequences; 20,595,339 total letters Query= NC_031927.1 Length=216121 Score E Sequences producing significant alignments: (Bits) Value seq1 100 4e-16 >seq1 Length=3588805 Score = 100 bits (110), Expect = 4e-16 Identities = 155/214 (72%), Gaps = 8/214 (4%) Strand=Plus/Minus Query 162612 TAGCGGTATTCTATTCAATCACGAAAGCTCACGCAGAGGAGAGACGTTCGTCACACGCAA 162671 || ||||||||||||||| ||||| | || | || ||| |||||||| ||||| Sbjct 59348 TAACGGTATTCTATTCAACCACGAGTCTCCCCGTCGTGGGCGGACTTTCGTCACGCGCAA 59289 Query 162672 GATCGTCCGAGCCTTGTC-CCGA-ATTAGTGTGGGACTC-CAAAGTG-ATCTACAACTTG 162727 |||| ||| ||| ||| |||| || | | || ||| | | || |||||| |||| Sbjct 59288 GATCTCCCGTGCC--GTCGCCGAGATCCATCTCGGGCTCTCGGACTGTATCTAC--CTTG 59233 Query 162728 GAAACCTCAATGCCCGACGTGACTGGGGACACGCCAAAGACTACGTAGAGGCTATGTGGT 162787 | ||||| | ||| || ||||||||||| ||||| |||||| | |||| ||||||| Sbjct 59232 GTAACCTGGACGCCAAGCGAGACTGGGGACATGCCAACGACTACATCGAGGGTATGTGGC 59173 Query 162788 TGATGCTTCAGCAAGAGAAGCCAGATGATTATGT 162821 | ||||| || || || || | ||||||| ||| Sbjct 59172 TTATGCTGCAACAGGACGAGGCGGATGATTTTGT 59139 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 691458975275760