Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Erythrobasidium_20hasegawianum_20[genbank_20GCA_5F001972285.1_202016 -12-09] 154 sequences; 39,152,147 total letters Query= NC_010671.1 Length=124279 Score E Sequences producing significant alignments: (Bits) Value seq29 208 6e-49 seq1 176 4e-39 seq35 168 5e-37 seq23 168 5e-37 seq11 145 6e-30 >seq29 Length=171343 Score = 208 bits (230), Expect = 6e-49 Identities = 364/522 (70%), Gaps = 11/522 (2%) Strand=Plus/Minus Query 61105 AAGGCGGAAGCTTCCTTCTGGACGGTGGAGGAGGTCGATTTGTCCAAAGACATGAATGAC 61164 || || || || ||||||||||| | |||||| | || | || || ||| || | ||| Sbjct 54625 AAAGCAGAGGCGTCCTTCTGGACCGCAGAGGAGATTGACCTCTCAAAGGACCTGCACGAC 54566 Query 61165 TGGGAGC----GTTTATCGAGCGGTGAACAACATTTCATTAAACATGTGTTGGCGTTCTT 61220 |||||| | | | | || | |||| | ||||| || || | || ||||| Sbjct 54565 TGGGAGAACAAGCTCAACAAG-GACGAACGCTACTTCATCTCTCACGTACTCGCATTCTT 54507 Query 61221 TGCCGCTTCGGACGGTATCGTCAATGAGAATTTATTGGAACGTTTCGCGCAG-GAGGTGC 61279 ||| || | |||||||||||||| ||||| | | ||||| ||| |||| || || | Sbjct 54506 CGCCTCTGCCGACGGTATCGTCAACGAGAACCTCCTAGAACGATTCA-GCAGCGAAGTCC 54448 Query 61280 AAGTGTCGGAGGCGCGTTGTTTCTACGGCTTCCAGATTGCCATGGAGAATGTCCACTCGG 61339 |||| | ||||| | || ||||||||||||||||| || || || ||||| | | Sbjct 54447 AAGTCGCAGAGGCCAGGTGCTTCTACGGCTTCCAGATCATGATTGAAAACATCCACGCAG 54388 Query 61340 AGATGTACAGTGTTCTCATCGATACGTACATCAGGGAGCGGGCGGAACGTGAACGATTGT 61399 | | ||| | ||||||||||| |||||| | || || | || ||| | | Sbjct 54387 AAGTCTACTCCCTCCTCATCGATACCTACATCCGCGAAACCGCACAGCGAACACGTCTAT 54328 Query 61400 TCAATGCCATCGAGACGATACCGGCGGTGAAGCGGAAAGCGGATTGGGCCTTCAATTGGA 61459 ||||||||||||||||||| || || | ||||| || || || ||||| | | ||||| Sbjct 54327 TCAATGCCATCGAGACGATGCCTGCCATCAAGCGCAAGGCTGAATGGGCAATGACTTGGA 54268 Query 61460 TCACCAGTACAA--CGGCTACATTTGGTGAACGATTGCTGGCATTTGCGGTGGTCGAGGG 61517 || ||| |||| | | |||||||| ||||| | ||||| || | || ||||| Sbjct 54267 TC-TCAG-ACAAGCAGTCGTGCTTTGGTGAGAGATTGGTAGCATTCGCCGCTGTAGAGGG 54210 Query 61518 TGTATTTTTCAGTGGATCGTTTGCCGCAATCTTTTGGTTGAAGAAACGTGGACTTATGCC 61577 | || ||| ||| || || ||||| ||||| ||| | ||||| |||||||| ||||| Sbjct 54209 CATCTTCTTCTCTGGTTCTTTCGCCGCCATCTTCTGGCTCAAGAAGCGTGGACTCATGCC 54150 Query 61578 CGGTCTGACCTTCAGCAATGAGTTGATATCACGCGACGAGGG 61619 ||||| |||||| ||||||| | || | || || ||||| Sbjct 54149 TGGTCTTACCTTCTCCAATGAGCTCATCTGCCGTGATGAGGG 54108 Score = 82.4 bits (90), Expect = 6e-11 Identities = 129/185 (70%), Gaps = 0/185 (0%) Strand=Plus/Minus Query 61717 ATCGAACAGGAATTTCTGACTGACGCTTTGCCCGTCTCACTCATCGGCATGAATTGTGGA 61776 |||||| |||| || || | || || | |||||| |||||||||||||| | Sbjct 53936 ATCGAAAAGGAGTTCCTCTCCGATGCCCTCCCCGTCCGCCTCATCGGCATGAACGCAGAG 53877 Query 61777 CTAATGTCGCAGTATATTGAATTTGTTGCCGACCGTCTGTTGGTCGATTTGGGTATGAAG 61836 | |||| ||||| || || ||||| || ||| | || | || | |||||| || Sbjct 53876 CAGATGTGCCAGTACATCGAGTTTGTAGCAGACAGACTACTAGTAGCACTGGGTAATGAG 53817 Query 61837 CGGATCTATAATACGAAAAACCCATTTGATTTCATGGACATGATTTCGCTGGATGGCAAG 61896 | ||| || || |||||||| || |||||||| ||||||||||||| |||||| Sbjct 53816 AAGCACTACAACTCGGCGAACCCATTCGACTTCATGGAGATGATTTCGCTGGCGGGCAAG 53757 Query 61897 ACGAA 61901 || || Sbjct 53756 ACCAA 53752 >seq1 Length=6229779 Score = 176 bits (194), Expect = 4e-39 Identities = 183/240 (76%), Gaps = 0/240 (0%) Strand=Plus/Minus Query 66313 CCAATCACCATCCTGTTCTACACGACGCATAAATAGATCAGGTATCCAGAGGGCGTAGAA 66372 ||||||||| | || ||||| || | ||| || | ||| || |||||||| |||||||| Sbjct 991579 CCAATCACCGTTCTCCTCTACTCGTCTCATGAACATATCGGGAATCCAGAGAGCGTAGAA 991520 Query 66373 GAGATCGCGTGCTCGTTGCTCCTCAATGCCGTGATTTTTGCGCAAGTCGAGGAACTCAAA 66432 |||||||||||||| || || | ||||| || |||||||||||||||||||| || Sbjct 991519 AAGATCGCGTGCTCGGACTTCTTCTTTACCGTGGTTCTTGCGCAAGTCGAGGAACTCGAA 991460 Query 66433 GATGTCGGCATGCCATGGTTCCAGGTAGATGGCGAACGAGCCCATACGTTTGCCGCCACC 66492 || || ||||||||||| || | ||||||||| || | || || ||| ||| || Sbjct 991459 GACATCCGCATGCCATGGCTCAATGTAGATGGCAAAGGCTCCAGGTCGCTTGTTGCCTCC 991400 Query 66493 TTGGTCGACGTAGCGAGCGACATTGTTGAAGACACGCAACATCGGTACGAGCCCGTTAGA 66552 ||| |||||||| |||||| |||||| |||| || | ||| ||||| | ||||| || Sbjct 991399 TTGATCGACGTATCGAGCGGTGTTGTTGTAGACTCGGAGCATAGGTACAATACCGTTCGA 991340 >seq35 Length=121122 Score = 168 bits (186), Expect = 5e-37 Identities = 359/527 (68%), Gaps = 12/527 (2%) Strand=Plus/Minus Query 61100 ACAAAAAGGCGGAAGCTTCCTTCTGGACGGTGGAGGAGGTCGATTTGTCCAAAGACATGA 61159 ||| |||| | || |||||||||||||| | |||||| |||| | || || || | Sbjct 14293 ACAGAAAG-CAGAGGCTTCCTTCTGGACCGCAGAGGAGATCGACCTCTCAAAGGATCTCC 14235 Query 61160 ATGACTGGGAGC----GTTTATCGAGCGGTGAACAACATTTCATTAAACATGTGTTGGCG 61215 | ||||||||| | | | | || | |||| ||||| || || | || Sbjct 14234 ACGACTGGGAGAACAAGCTCAACAAG-GACGAACGTTTCTTCATCTCTCACGTACTCGCA 14176 Query 61216 TTCTTTGCCGCTTCGGACGGTATCGTCAATGAGAATTTATTGGAACGTTTCGCGCAG-GA 61274 ||||| || | | || ||||||||||| ||||| | | || || ||| |||| || Sbjct 14175 TTCTTCGCTTCCGCCGATGGTATCGTCAACGAGAACCTCCTAGAGCGATTCA-GCAGCGA 14117 Query 61275 GGTGCAAGTGTCGGAGGCGCGTTGTTTCTACGGCTTCCAGATTGCCATGGAGAATGTCCA 61334 || || || | ||||| | || ||||||||||||||||| || || || |||| Sbjct 14116 AGTCCAGGTCGCCGAGGCCAGGTGCTTCTACGGCTTCCAGATCATGATTGAAAACATCCA 14057 Query 61335 CTCGGAGATGTACAGTGTTCTCATCGATACGTACATCAGGGAGCGGGCGGAACGTGAACG 61394 | | || | ||| | ||||||||||| |||||| | || || | | ||| Sbjct 14056 CGCAGAAGTCTACTCCCTCCTCATCGATACATACATCCGCGAAACTGCCCAGAGGACACG 13997 Query 61395 ATTGTTCAATGCCATCGAGACGATACCGGCGGTGAAGCGGAAAGCGGATTGGGCCTTCAA 61454 | |||||||||||||||||||| || || | ||||| || || || ||||| | | Sbjct 13996 TCTTTTCAATGCCATCGAGACGATGCCAGCCATCAAGCGCAAGGCTGAATGGGCAATGAC 13937 Query 61455 TTGGATCACCAGTACAAC--GGCTACATTTGGTGAACGATTGCTGGCATTTGCGGTGGTC 61512 |||||| | || |||| | | ||||||||||||||| | || || || | || Sbjct 13936 ATGGATCTC-AG-ACAAGCAGTCGTGCTTTGGTGAACGATTGGTAGCGTTCGCCGCTGTA 13879 Query 61513 GAGGGTGTATTTTTCAGTGGATCGTTTGCCGCAATCTTTTGGTTGAAGAAACGTGGACTT 61572 ||||| | || ||| ||| || || ||||| ||||| ||| | ||||| |||||||| Sbjct 13878 GAGGGCATCTTCTTCTCTGGTTCTTTCGCCGCCATCTTCTGGCTCAAGAAGCGTGGACTC 13819 Query 61573 ATGCCCGGTCTGACCTTCAGCAATGAGTTGATATCACGCGACGAGGG 61619 ||||| ||||| || ||| ||| ||| | || | || || ||||| Sbjct 13818 ATGCCTGGTCTTACATTCTCCAACGAGCTCATCTGCCGTGATGAGGG 13772 >seq23 Length=274361 Score = 168 bits (186), Expect = 5e-37 Identities = 359/527 (68%), Gaps = 12/527 (2%) Strand=Plus/Minus Query 61100 ACAAAAAGGCGGAAGCTTCCTTCTGGACGGTGGAGGAGGTCGATTTGTCCAAAGACATGA 61159 ||| |||| | || |||||||||||||| | |||||| |||| | || || || | Sbjct 224124 ACAGAAAG-CAGAGGCTTCCTTCTGGACCGCAGAGGAGATCGACCTCTCAAAGGATCTCC 224066 Query 61160 ATGACTGGGAGC----GTTTATCGAGCGGTGAACAACATTTCATTAAACATGTGTTGGCG 61215 | ||||||||| | | | | || | |||| ||||| || || | || Sbjct 224065 ACGACTGGGAGAACAAGCTCAACAAG-GACGAACGTTTCTTCATCTCTCACGTACTCGCA 224007 Query 61216 TTCTTTGCCGCTTCGGACGGTATCGTCAATGAGAATTTATTGGAACGTTTCGCGCAG-GA 61274 ||||| || | | || ||||||||||| ||||| | | || || ||| |||| || Sbjct 224006 TTCTTCGCTTCCGCCGATGGTATCGTCAACGAGAACCTCCTAGAGCGATTCA-GCAGCGA 223948 Query 61275 GGTGCAAGTGTCGGAGGCGCGTTGTTTCTACGGCTTCCAGATTGCCATGGAGAATGTCCA 61334 || || || | ||||| | || ||||||||||||||||| || || || |||| Sbjct 223947 AGTCCAGGTCGCCGAGGCCAGGTGCTTCTACGGCTTCCAGATCATGATTGAAAACATCCA 223888 Query 61335 CTCGGAGATGTACAGTGTTCTCATCGATACGTACATCAGGGAGCGGGCGGAACGTGAACG 61394 | | || | ||| | ||||||||||| |||||| | || || | | ||| Sbjct 223887 CGCAGAAGTCTACTCCCTCCTCATCGATACATACATCCGCGAAACTGCCCAGAGGACACG 223828 Query 61395 ATTGTTCAATGCCATCGAGACGATACCGGCGGTGAAGCGGAAAGCGGATTGGGCCTTCAA 61454 | |||||||||||||||||||| || || | ||||| || || || ||||| | | Sbjct 223827 TCTTTTCAATGCCATCGAGACGATGCCAGCCATCAAGCGCAAGGCTGAATGGGCAATGAC 223768 Query 61455 TTGGATCACCAGTACAAC--GGCTACATTTGGTGAACGATTGCTGGCATTTGCGGTGGTC 61512 |||||| | || |||| | | ||||||||||||||| | || || || | || Sbjct 223767 ATGGATCTC-AG-ACAAGCAGTCGTGCTTTGGTGAACGATTGGTAGCGTTCGCCGCTGTA 223710 Query 61513 GAGGGTGTATTTTTCAGTGGATCGTTTGCCGCAATCTTTTGGTTGAAGAAACGTGGACTT 61572 ||||| | || ||| ||| || || ||||| ||||| ||| | ||||| |||||||| Sbjct 223709 GAGGGCATCTTCTTCTCTGGTTCTTTCGCCGCCATCTTCTGGCTCAAGAAGCGTGGACTC 223650 Query 61573 ATGCCCGGTCTGACCTTCAGCAATGAGTTGATATCACGCGACGAGGG 61619 ||||| ||||| || ||| ||| ||| | || | || || ||||| Sbjct 223649 ATGCCTGGTCTTACATTCTCCAACGAGCTCATCTGCCGTGATGAGGG 223603 >seq11 Length=1302298 Score = 145 bits (160), Expect = 6e-30 Identities = 176/240 (73%), Gaps = 0/240 (0%) Strand=Plus/Minus Query 66313 CCAATCACCATCCTGTTCTACACGACGCATAAATAGATCAGGTATCCAGAGGGCGTAGAA 66372 ||||||||||| | |||||||| | ||| || | || || |||||||| |||||||| Sbjct 896215 CCAATCACCATTTTCCTCTACACGTCTCATGAACATGTCGGGGATCCAGAGAGCGTAGAA 896156 Query 66373 GAGATCGCGTGCTCGTTGCTCCTCAATGCCGTGATTTTTGCGCAAGTCGAGGAACTCAAA 66432 ||| ||||| || || || || | ||||| || || || | ||||||||| || || Sbjct 896155 GAGGTCGCGAGCGCGCACTTCTTCTTTACCGTGGTTCTTACGGAGGTCGAGGAATTCGAA 896096 Query 66433 GATGTCGGCATGCCATGGTTCCAGGTAGATGGCGAACGAGCCCATACGTTTGCCGCCACC 66492 | || || |||||||| || | |||||| || || | || || ||| ||| || Sbjct 896095 AACATCCGCGTGCCATGGCTCAATGTAGATTGCAAAGGCTCCAGGTCGCTTGTTGCCTCC 896036 Query 66493 TTGGTCGACGTAGCGAGCGACATTGTTGAAGACACGCAACATCGGTACGAGCCCGTTAGA 66552 ||| |||||||| |||||| |||||| |||| |||| |||||| |||| ||||| || Sbjct 896035 TTGATCGACGTATCGAGCGGTGTTGTTGTAGACTCGCAGCATCGGGACGATACCGTTTGA 895976 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397567253814560