Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Erythrobasidium_20yunnanense_20[genbank_20GCA_5F001600175.1_202016- 03-01] 11 sequences; 20,930,538 total letters Query= AAMG01000185.1 Length=266 Score E Sequences producing significant alignments: (Bits) Value seq5 104 4e-20 seq2 84.2 3e-14 >seq5 Length=2034464 Score = 104 bits (114), Expect = 4e-20 Identities = 74/83 (89%), Gaps = 3/83 (4%) Strand=Plus/Plus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 |||||||||||||||||||| ||||||||||| ||||||||| ||||||||||| | || Sbjct 17179 GTACAAAGGGCAGGGACGTAWTCAACGCGAGC-TGATGACTCACGCTTACTAGG--TATC 17235 Query 61 CTCGTTGAAGACCAACAATTGCA 83 |||||||||| ||| ||||||| Sbjct 17236 TTCGTTGAAGAGCAATAATTGCA 17258 >seq2 Length=3262383 Score = 84.2 bits (92), Expect = 3e-14 Identities = 54/58 (93%), Gaps = 1/58 (2%) Strand=Plus/Plus Query 172 CGCGT-GCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCC 228 ||||| || |||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct 841870 CGCGTAGCACCCCAGAACATCTAAGGGCGTCACAGACCTGTTATTGCCTCAAACTTCC 841927 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 751999919865