Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Erythrobasidium_20yunnanense_20[genbank_20GCA_5F001600175.1_202016- 03-01] 11 sequences; 20,930,538 total letters Query= AAMG01000911.1 Length=280 Score E Sequences producing significant alignments: (Bits) Value seq2 313 4e-83 seq1 91.5 2e-16 >seq2 Length=3262383 Score = 313 bits (346), Expect = 4e-83 Identities = 207/229 (90%), Gaps = 1/229 (0%) Strand=Plus/Plus Query 27 CGCGT-GCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCAT 85 ||||| || |||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct 841870 CGCGTAGCACCCCAGAACATCTAAGGGCGTCACAGACCTGTTATTGCCTCAAACTTCCAT 841929 Query 86 TGGCTGGAAGCCAATAGTCCCTCTAAGAAGCCAGCCACCAACCATAGTCGATGGGGCTAT 145 ||| | || ||||||||||||||||||||| |||||||| ||||| ||||||| Sbjct 841930 CAGCTAAACGCTGWTAGTCCCTCTAAGAAGCCAGCGACCAACCAAAGTCGGCCGGGCTAT 841989 Query 146 TTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAACCAGACAAATCACTCCACCAACTA 205 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 841990 TTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAACCAGACAAATCACTCCACCAACTA 842049 Query 206 AGAACGGCCATGCACCACCACCCATAGAATCAAGAAAGAGCTATCAATC 254 |||||||||||||||||||| ||| ||||||||||||||| |||||| Sbjct 842050 AGAACGGCCATGCACCACCAACCACGAAATCAAGAAAGAGCTTTCAATC 842098 >seq1 Length=4947887 Score = 91.5 bits (100), Expect = 2e-16 Identities = 55/58 (95%), Gaps = 0/58 (0%) Strand=Plus/Plus Query 139 GGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAACCAGACAAATCACTC 196 |||||||||||||| || ||||||||||||||||||||||||||||||||||||| || Sbjct 4360608 GGGCTATTTAGCAGATTGAGGTCTCGTTCGTTATCGGAATTAACCAGACAAATCAGTC 4360665 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 796799915091