Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Erythrobasidium_20yunnanense_20[genbank_20GCA_5F001600175.1_202016- 03-01] 11 sequences; 20,930,538 total letters Query= AAMG01002186.1 Length=328 Score E Sequences producing significant alignments: (Bits) Value seq2 174 3e-41 seq5 111 3e-22 >seq2 Length=3262383 Score = 174 bits (192), Expect = 3e-41 Identities = 125/142 (88%), Gaps = 2/142 (1%) Strand=Plus/Minus Query 20 GAGCGAGACCTTAACCTGCTAAATAGCCAGGCCCGCTTTGGCGGGTCGCCGGCTTCTTAG 79 || ||||||||||||||||||||||||| |||| |||||| |||||| |||||||||| Sbjct 842011 GAACGAGACCTTAACCTGCTAAATAGCCCGGCCGACTTTGGTTGGTCGCTGGCTTCTTAG 841952 Query 80 AGGGACTATCGGC-TCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTGATGCCCTT 138 |||||||| | || | ||| |||||||||||||||||||||||||||||||| |||||| Sbjct 841951 AGGGACTAWCAGCGTTTAGCTGATGGAAGTTTGAGGCAATAACAGGTCTGTGACGCCCTT 841892 Query 139 AGATGTTCTGGGCCGC-ACGCG 159 |||||||||||| || ||||| Sbjct 841891 AGATGTTCTGGGGTGCTACGCG 841870 >seq5 Length=2034464 Score = 111 bits (122), Expect = 3e-22 Identities = 73/80 (91%), Gaps = 1/80 (1%) Strand=Plus/Minus Query 249 TGCAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGA 308 |||||||||||||||||||||| || | ||||||||||| | ||||||||| |||||||| Sbjct 17258 TGCAATTATTGCTCTTCAACGAAGA-TACCTAGTAAGCGTGAGTCATCAGCTCGCGTTGA 17200 Query 309 TTACGTCCCTGCCCTTTGTA 328 ||||||||||||||||||| Sbjct 17199 WTACGTCCCTGCCCTTTGTA 17180 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 947199895808