Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fibularhizoctonia_20sp._20CBS_20109695_20[genbank_20GCA_5F001630335.
1_202016-04-25] 1,914 sequences; 95,118,143 total letters
Query= AAMG01000278.1
Length=318
Score E
Sequences producing significant alignments: (Bits) Value
seq671 365 8e-99
seq600 365 8e-99
seq755 331 2e-88
>seq671
Length=9878
Score = 365 bits (404), Expect = 8e-99
Identities = 251/282 (89%), Gaps = 1/282 (0%)
Strand=Plus/Minus
Query 37 GCATGCCCTTCACTGGGTGTGCCGGGGAGCCAGGACTTTTACTTTGAAAAAATTAGAGTG 96
|| || |||| |||||||| | |||||| ||||||||||||| |||| ||||||||||||
Sbjct 9875 GCGTGTCCTTTACTGGGTGCGTCGGGGAACCAGGACTTTTACCTTGAGAAAATTAGAGTG 9816
Query 97 TTCAAAGCAGGCCTTTGCTCGAATACATTAGCATGGAATAATAGAATAGGACGTGCGGTT 156
|||||||||||||| ||| ||||||||||||||||||||||| ||||||||||||||||
Sbjct 9815 TTCAAAGCAGGCCTATGCCCGAATACATTAGCATGGAATAATGAAATAGGACGTGCGGTT 9756
Query 157 CTATTTTGTTGGTTTCTAGGACCGCCGTAATGATTAATAGGGATAGTCGGGGGTGTCAGT 216
||||||||||||||||||| ||||||||||||||||||||| ||| ||||| | |||
Sbjct 9755 CTATTTTGTTGGTTTCTAGAGTCGCCGTAATGATTAATAGGGACAGTTGGGGGCATTAGT 9696
Query 217 ATTCAATTGTCAGAGGTGAAATTCTTGGATTTATTGAAGACTAACTACTGCGAAAGCGTT 276
||||| ||| |||||||||||||||||||||| ||||||||||||| ||||||||| ||
Sbjct 9695 ATTCAGTTGCTAGAGGTGAAATTCTTGGATTTACTGAAGACTAACTATTGCGAAAGCATT 9636
Query 277 CACCAAGGATGTTTTCATTAATCAGTGAACGAAAGTTAGGGG 318
|||||||||||||||||||||| ||||||| ||||||||
Sbjct 9635 TGCCAAGGATGTTTTCATTAATCA-AGAACGAAGGTTAGGGG 9595
>seq600
Length=13353
Score = 365 bits (404), Expect = 8e-99
Identities = 251/282 (89%), Gaps = 1/282 (0%)
Strand=Plus/Minus
Query 37 GCATGCCCTTCACTGGGTGTGCCGGGGAGCCAGGACTTTTACTTTGAAAAAATTAGAGTG 96
|| || |||| |||||||| | |||||| ||||||||||||| |||| ||||||||||||
Sbjct 13352 GCGTGTCCTTTACTGGGTGCGTCGGGGAACCAGGACTTTTACCTTGAGAAAATTAGAGTG 13293
Query 97 TTCAAAGCAGGCCTTTGCTCGAATACATTAGCATGGAATAATAGAATAGGACGTGCGGTT 156
|||||||||||||| ||| ||||||||||||||||||||||| ||||||||||||||||
Sbjct 13292 TTCAAAGCAGGCCTATGCCCGAATACATTAGCATGGAATAATGAAATAGGACGTGCGGTT 13233
Query 157 CTATTTTGTTGGTTTCTAGGACCGCCGTAATGATTAATAGGGATAGTCGGGGGTGTCAGT 216
||||||||||||||||||| ||||||||||||||||||||| ||| ||||| | |||
Sbjct 13232 CTATTTTGTTGGTTTCTAGAGTCGCCGTAATGATTAATAGGGACAGTTGGGGGCATTAGT 13173
Query 217 ATTCAATTGTCAGAGGTGAAATTCTTGGATTTATTGAAGACTAACTACTGCGAAAGCGTT 276
||||| ||| |||||||||||||||||||||| ||||||||||||| ||||||||| ||
Sbjct 13172 ATTCAGTTGCTAGAGGTGAAATTCTTGGATTTACTGAAGACTAACTATTGCGAAAGCATT 13113
Query 277 CACCAAGGATGTTTTCATTAATCAGTGAACGAAAGTTAGGGG 318
|||||||||||||||||||||| ||||||| ||||||||
Sbjct 13112 TGCCAAGGATGTTTTCATTAATCA-AGAACGAAGGTTAGGGG 13072
>seq755
Length=6789
Score = 331 bits (366), Expect = 2e-88
Identities = 223/248 (90%), Gaps = 1/248 (0%)
Strand=Plus/Plus
Query 71 ACTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTCGAATACATTAGCAT 130
|||||||| |||| |||||||||||||||||||||||||| ||| |||||||||||||||
Sbjct 1 ACTTTTACCTTGAGAAAATTAGAGTGTTCAAAGCAGGCCTATGCCCGAATACATTAGCAT 60
Query 131 GGAATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACCGCCGTAATGAT 190
|||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct 61 GGAATAATGAAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGAGTCGCCGTAATGAT 120
Query 191 TAATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGGATTTAT 250
||||||||| ||| ||||| | |||||||| ||| ||||||||||||||||||||||
Sbjct 121 TAATAGGGACAGTTGGGGGCATTAGTATTCAGTTGCTAGAGGTGAAATTCTTGGATTTAC 180
Query 251 TGAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTGAACGAAA 310
||||||||||||| ||||||||| || |||||||||||||||||||||| |||||||
Sbjct 181 TGAAGACTAACTATTGCGAAAGCATTTGCCAAGGATGTTTTCATTAATCA-AGAACGAAG 239
Query 311 GTTAGGGG 318
||||||||
Sbjct 240 GTTAGGGG 247
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 915182483072
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |