Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fibularhizoctonia_20sp._20CBS_20109695_20[genbank_20GCA_5F001630335.
1_202016-04-25] 1,914 sequences; 95,118,143 total letters
Query= AAMG01001634.1
Length=217
Score E
Sequences producing significant alignments: (Bits) Value
seq671 181 1e-43
seq600 181 1e-43
seq755 163 3e-38
>seq671
Length=9878
Score = 181 bits (200), Expect = 1e-43
Identities = 125/139 (90%), Gaps = 3/139 (2%)
Strand=Plus/Plus
Query 1 CGTCTCTAGAAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGT 60
|| ||||||||||||||||||||| ||||||||||||| ||||||||||||||||||
Sbjct 9732 CGACTCTAGAAACCAACAAAATAGAACCGCACGTCCTATTTCATTATTCCATGCTAATGT 9791
Query 61 ATTCGGGCGTAAGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAGTCCTGGTTCCT 120
|||||||| || |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 9792 ATTCGGGCATAGGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAGTCCTGGTTCCC 9851
Query 121 C--CGCACACCAATGAAGG 137
| ||||| ||| | ||||
Sbjct 9852 CGACGCAC-CCAGTAAAGG 9869
>seq600
Length=13353
Score = 181 bits (200), Expect = 1e-43
Identities = 125/139 (90%), Gaps = 3/139 (2%)
Strand=Plus/Plus
Query 1 CGTCTCTAGAAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGT 60
|| ||||||||||||||||||||| ||||||||||||| ||||||||||||||||||
Sbjct 13209 CGACTCTAGAAACCAACAAAATAGAACCGCACGTCCTATTTCATTATTCCATGCTAATGT 13268
Query 61 ATTCGGGCGTAAGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAGTCCTGGTTCCT 120
|||||||| || |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 13269 ATTCGGGCATAGGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAGTCCTGGTTCCC 13328
Query 121 C--CGCACACCAATGAAGG 137
| ||||| ||| | ||||
Sbjct 13329 CGACGCAC-CCAGTAAAGG 13346
>seq755
Length=6789
Score = 163 bits (180), Expect = 3e-38
Identities = 102/110 (93%), Gaps = 0/110 (0%)
Strand=Plus/Minus
Query 1 CGTCTCTAGAAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGT 60
|| ||||||||||||||||||||| ||||||||||||| ||||||||||||||||||
Sbjct 110 CGACTCTAGAAACCAACAAAATAGAACCGCACGTCCTATTTCATTATTCCATGCTAATGT 51
Query 61 ATTCGGGCGTAAGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAGT 110
|||||||| || ||||||||||||||||||||||||||||||||||||||
Sbjct 50 ATTCGGGCATAGGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAGT 1
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 595188963876
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |