Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fibularhizoctonia_20sp._20CBS_20109695_20[genbank_20GCA_5F001630335. 1_202016-04-25] 1,914 sequences; 95,118,143 total letters Query= AAMG01001634.1 Length=217 Score E Sequences producing significant alignments: (Bits) Value seq671 181 1e-43 seq600 181 1e-43 seq755 163 3e-38 >seq671 Length=9878 Score = 181 bits (200), Expect = 1e-43 Identities = 125/139 (90%), Gaps = 3/139 (2%) Strand=Plus/Plus Query 1 CGTCTCTAGAAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGT 60 || ||||||||||||||||||||| ||||||||||||| |||||||||||||||||| Sbjct 9732 CGACTCTAGAAACCAACAAAATAGAACCGCACGTCCTATTTCATTATTCCATGCTAATGT 9791 Query 61 ATTCGGGCGTAAGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAGTCCTGGTTCCT 120 |||||||| || ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 9792 ATTCGGGCATAGGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAGTCCTGGTTCCC 9851 Query 121 C--CGCACACCAATGAAGG 137 | ||||| ||| | |||| Sbjct 9852 CGACGCAC-CCAGTAAAGG 9869 >seq600 Length=13353 Score = 181 bits (200), Expect = 1e-43 Identities = 125/139 (90%), Gaps = 3/139 (2%) Strand=Plus/Plus Query 1 CGTCTCTAGAAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGT 60 || ||||||||||||||||||||| ||||||||||||| |||||||||||||||||| Sbjct 13209 CGACTCTAGAAACCAACAAAATAGAACCGCACGTCCTATTTCATTATTCCATGCTAATGT 13268 Query 61 ATTCGGGCGTAAGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAGTCCTGGTTCCT 120 |||||||| || ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 13269 ATTCGGGCATAGGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAGTCCTGGTTCCC 13328 Query 121 C--CGCACACCAATGAAGG 137 | ||||| ||| | |||| Sbjct 13329 CGACGCAC-CCAGTAAAGG 13346 >seq755 Length=6789 Score = 163 bits (180), Expect = 3e-38 Identities = 102/110 (93%), Gaps = 0/110 (0%) Strand=Plus/Minus Query 1 CGTCTCTAGAAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGT 60 || ||||||||||||||||||||| ||||||||||||| |||||||||||||||||| Sbjct 110 CGACTCTAGAAACCAACAAAATAGAACCGCACGTCCTATTTCATTATTCCATGCTAATGT 51 Query 61 ATTCGGGCGTAAGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAGT 110 |||||||| || |||||||||||||||||||||||||||||||||||||| Sbjct 50 ATTCGGGCATAGGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAGT 1 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 595188963876