Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fibularhizoctonia_20sp._20CBS_20109695_20[genbank_20GCA_5F001630335. 1_202016-04-25] 1,914 sequences; 95,118,143 total letters Query= AAMG01002199.1 Length=543 Score E Sequences producing significant alignments: (Bits) Value seq95 778 0.0 seq600 556 4e-156 seq1697 242 1e-61 >seq95 Length=298476 Score = 778 bits (862), Expect = 0.0 Identities = 500/541 (92%), Gaps = 10/541 (2%) Strand=Plus/Plus Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66 |||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct 39361 CTTTTGTTCTACTGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATC 39420 Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCATCAACCCGGATC 126 |||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||| Sbjct 39421 TTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCTTCAACCCAGATC 39480 Query 127 GGCCCGCGAAGGACCTTAACGCCAGAAAATGGTCGG---TGAAGACCAGTTCCGCTTCAT 183 ||||||||||||||||||| |||| ||| || || | || |||| || || |||| Sbjct 39481 GGCCCGCGAAGGACCTTAAAGCCA--AAAGGGGGGGCTATTAACCCCAGCTCTGCATCAT 39538 Query 184 TGATTAAGTaaaaaaaCGATAAGGGTAGTGGTATTTCACTTGCGCCGAAACGGCTCCCAC 243 || |||||||||| ||||||| ||||||||||||||| |||||||| |||||||| Sbjct 39539 CGAATAAGTAAAAAGACGATAAAGGTAGTGGTATTTCAACGGCGCCGAA---GCTCCCAC 39595 Query 244 TTATTCTACA-CCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAACAGGGT 302 |||| ||||| ||||| | ||| |||||||| ||| ||||||||||||||||||||||| Sbjct 39596 TTATGCTACACCCTCT-ATGTCTTTTCACAATGTCAAACTAGAGTCAAGCTCAACAGGGT 39654 Query 303 CTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTA 362 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct 39655 CTTCTTTCCCCGCTGATTCTGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTA 39714 Query 363 GATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAGG 422 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 39715 GATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAGG 39774 Query 423 CATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAAT 482 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 39775 CATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAAT 39834 Query 483 TTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACATCACTTTCT 542 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct 39835 TTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACACCACTTTCT 39894 Query 543 G 543 | Sbjct 39895 G 39895 >seq600 Length=13353 Score = 556 bits (616), Expect = 4e-156 Identities = 343/363 (94%), Gaps = 5/363 (1%) Strand=Plus/Plus Query 182 ATTGATTAAGTaaaaaaaCGATAAGGGTAGTGGTATTTCACTTGCGCCGAAACGGCTCCC 241 || || |||||||||| ||||||| ||||||||||||||| |||||||| |||||| Sbjct 8208 ATCGAATAAGTAAAAAGACGATAAAGGTAGTGGTATTTCAACGGCGCCGAA---GCTCCC 8264 Query 242 ACTTATTCTACA-CCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAACAGG 300 |||||| ||||| ||||| | ||| |||||||| ||| ||||||||||||||||||||| Sbjct 8265 ACTTATGCTACACCCTCT-ATGTCTTTTCACAATGTCAAACTAGAGTCAAGCTCAACAGG 8323 Query 301 GTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAG 360 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct 8324 GTCTTCTTTCCCCGCTGATTCTGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAG 8383 Query 361 TAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGA 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 8384 TAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGA 8443 Query 421 GGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGA 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 8444 GGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGA 8503 Query 481 ATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACATCACTTT 540 ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct 8504 ATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACACCACTTT 8563 Query 541 CTG 543 ||| Sbjct 8564 CTG 8566 Score = 167 bits (184), Expect = 8e-39 Identities = 94/95 (99%), Gaps = 0/95 (0%) Strand=Plus/Plus Query 300 GGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATA 359 |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct 1 GGTCTTCTTTCCCCGCTGATTCTGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATA 60 Query 360 GTAGATAGGGACAGTGGGAATCTCGTTAATCCATT 394 ||||||||||||||||||||||||||||||||||| Sbjct 61 GTAGATAGGGACAGTGGGAATCTCGTTAATCCATT 95 >seq1697 Length=1326 Score = 242 bits (268), Expect = 1e-61 Identities = 152/161 (94%), Gaps = 2/161 (1%) Strand=Plus/Minus Query 236 GCTCCCACTTATTCTACACCTCTCAA-GTCATTTCACAAAGTCGGACTAGAGTCAAGCTC 294 |||||||||||| ||||||| ||| | ||| |||||||| ||| ||||||||||||||| Sbjct 1322 GCTCCCACTTATGCTACACC-CTCTATGTCTTTTCACAATGTCAAACTAGAGTCAAGCTC 1264 Query 295 AACAGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCT 354 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct 1263 AACAGGGTCTTCTTTCCCCGCTGATTCTGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCT 1204 Query 355 AGATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTC 395 ||||||||||||||||||||||||||||||||||||||||| Sbjct 1203 AGATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTC 1163 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1635168702272