Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fibularhizoctonia_20sp._20CBS_20109695_20[genbank_20GCA_5F001630335.
1_202016-04-25] 1,914 sequences; 95,118,143 total letters
Query= AAMG01002199.1
Length=543
Score E
Sequences producing significant alignments: (Bits) Value
seq95 778 0.0
seq600 556 4e-156
seq1697 242 1e-61
>seq95
Length=298476
Score = 778 bits (862), Expect = 0.0
Identities = 500/541 (92%), Gaps = 10/541 (2%)
Strand=Plus/Plus
Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66
|||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 39361 CTTTTGTTCTACTGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATC 39420
Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCATCAACCCGGATC 126
|||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||
Sbjct 39421 TTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCTTCAACCCAGATC 39480
Query 127 GGCCCGCGAAGGACCTTAACGCCAGAAAATGGTCGG---TGAAGACCAGTTCCGCTTCAT 183
||||||||||||||||||| |||| ||| || || | || |||| || || ||||
Sbjct 39481 GGCCCGCGAAGGACCTTAAAGCCA--AAAGGGGGGGCTATTAACCCCAGCTCTGCATCAT 39538
Query 184 TGATTAAGTaaaaaaaCGATAAGGGTAGTGGTATTTCACTTGCGCCGAAACGGCTCCCAC 243
|| |||||||||| ||||||| ||||||||||||||| |||||||| ||||||||
Sbjct 39539 CGAATAAGTAAAAAGACGATAAAGGTAGTGGTATTTCAACGGCGCCGAA---GCTCCCAC 39595
Query 244 TTATTCTACA-CCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAACAGGGT 302
|||| ||||| ||||| | ||| |||||||| ||| |||||||||||||||||||||||
Sbjct 39596 TTATGCTACACCCTCT-ATGTCTTTTCACAATGTCAAACTAGAGTCAAGCTCAACAGGGT 39654
Query 303 CTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTA 362
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct 39655 CTTCTTTCCCCGCTGATTCTGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTA 39714
Query 363 GATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAGG 422
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 39715 GATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAGG 39774
Query 423 CATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAAT 482
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 39775 CATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAAT 39834
Query 483 TTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACATCACTTTCT 542
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct 39835 TTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACACCACTTTCT 39894
Query 543 G 543
|
Sbjct 39895 G 39895
>seq600
Length=13353
Score = 556 bits (616), Expect = 4e-156
Identities = 343/363 (94%), Gaps = 5/363 (1%)
Strand=Plus/Plus
Query 182 ATTGATTAAGTaaaaaaaCGATAAGGGTAGTGGTATTTCACTTGCGCCGAAACGGCTCCC 241
|| || |||||||||| ||||||| ||||||||||||||| |||||||| ||||||
Sbjct 8208 ATCGAATAAGTAAAAAGACGATAAAGGTAGTGGTATTTCAACGGCGCCGAA---GCTCCC 8264
Query 242 ACTTATTCTACA-CCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAACAGG 300
|||||| ||||| ||||| | ||| |||||||| ||| |||||||||||||||||||||
Sbjct 8265 ACTTATGCTACACCCTCT-ATGTCTTTTCACAATGTCAAACTAGAGTCAAGCTCAACAGG 8323
Query 301 GTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAG 360
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct 8324 GTCTTCTTTCCCCGCTGATTCTGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAG 8383
Query 361 TAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGA 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 8384 TAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGA 8443
Query 421 GGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGA 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 8444 GGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGA 8503
Query 481 ATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACATCACTTT 540
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct 8504 ATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACACCACTTT 8563
Query 541 CTG 543
|||
Sbjct 8564 CTG 8566
Score = 167 bits (184), Expect = 8e-39
Identities = 94/95 (99%), Gaps = 0/95 (0%)
Strand=Plus/Plus
Query 300 GGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATA 359
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct 1 GGTCTTCTTTCCCCGCTGATTCTGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATA 60
Query 360 GTAGATAGGGACAGTGGGAATCTCGTTAATCCATT 394
|||||||||||||||||||||||||||||||||||
Sbjct 61 GTAGATAGGGACAGTGGGAATCTCGTTAATCCATT 95
>seq1697
Length=1326
Score = 242 bits (268), Expect = 1e-61
Identities = 152/161 (94%), Gaps = 2/161 (1%)
Strand=Plus/Minus
Query 236 GCTCCCACTTATTCTACACCTCTCAA-GTCATTTCACAAAGTCGGACTAGAGTCAAGCTC 294
|||||||||||| ||||||| ||| | ||| |||||||| ||| |||||||||||||||
Sbjct 1322 GCTCCCACTTATGCTACACC-CTCTATGTCTTTTCACAATGTCAAACTAGAGTCAAGCTC 1264
Query 295 AACAGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCT 354
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct 1263 AACAGGGTCTTCTTTCCCCGCTGATTCTGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCT 1204
Query 355 AGATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTC 395
|||||||||||||||||||||||||||||||||||||||||
Sbjct 1203 AGATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTC 1163
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1635168702272
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |