Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fibularhizoctonia_20sp._20CBS_20109695_20[genbank_20GCA_5F001630335. 1_202016-04-25] 1,914 sequences; 95,118,143 total letters Query= NC_010671.1 Length=124279 Score E Sequences producing significant alignments: (Bits) Value seq173 232 5e-56 seq362 185 7e-42 seq92 129 5e-25 >seq173 Length=183199 Score = 232 bits (256), Expect = 5e-56 Identities = 562/842 (67%), Gaps = 18/842 (2%) Strand=Plus/Plus Query 61087 ATTTGGCGCATGTACAAAAAGGCGGAAGCTTCCTTCTGGACGGTGGAGGAGGTCGATTTG 61146 || |||| |||||||| ||||| || ||||| |||||||| | ||||||| | || || Sbjct 160833 ATCTGGCAAATGTACAAGAAGGCCGAGGCTTCTTTCTGGACAGCGGAGGAGATGGACCTG 160892 Query 61147 TCCAAAGACATGAATGACTGGGAGC----GTTTATCGAGCGGTGAACAACATTTCATTAA 61202 ||||| |||||| ||||||| | | | | ||| | |||| || ||||| Sbjct 160893 TCCAAGGACATGGTTGACTGGAACACCAAGCTCAACGA-CAACGAACGTCACTTCATCTC 160951 Query 61203 ACATGTGTTGGCGTTCTTTGCCGCTTCGGACGGTATCGTCAATGAGAATTTATTGGAACG 61262 || || | || ||||| || || || || ||||||||||| ||||| | | || || Sbjct 160952 CCACGTCCTCGCCTTCTTCGCTGCGTCCGATGGTATCGTCAACGAGAACCTCGTTGAGCG 161011 Query 61263 TTTCGCGCAGGAGGTGCAAGTGTCGGAGGCGCGTTGTTTCTACGGCTTCCAGATTGCCAT 61322 ||| || | ||||| |||| | ||||| || || ||||||||||||||||| || Sbjct 161012 GTTCTCGAACGAGGTCCAAGCCGCCGAGGCCCGCTGCTTCTACGGCTTCCAGATCATGAT 161071 Query 61323 GGAGAATGTCCACTCGGAGATGTACAGTGTTCTCATCGATACGTACATCAGGGAGCGGGC 61382 |||||| ||||||| |||| ||| | |||||||| || ||||||| ||| | | Sbjct 161072 GGAGAACATCCACTCCGAGACCTACTCCCTCCTCATCGACACCTACATCAAGGACCCCGT 161131 Query 61383 GGAACGTGAACGATTGTTCAATGCCATCGAGACGATACCGGCGGTGAAGCGGAAAGCGGA 61442 | | || || | ||| | ||| ||||||| || || | ||| ||| || || Sbjct 161132 GCAGCGCGAGTACCTCTTCGACGCCGTCGAGACCATCCCTTGCATCAAGAAGAAGGCCGA 161191 Query 61443 TTGGGCCTTCAATTGGATCAC-CAGTACAACGGCTACATTTGGTGAACGATTGCTGGCAT 61501 |||||| | || |||||| | | |||| | | || || | |||||| | | || | Sbjct 161192 CTGGGCCATGAAGTGGATCTCAGATGACAA-GTCCACCTTCGCTGAACGCCTCGTCGCCT 161250 Query 61502 TTGCGGTGGTCGAGGGTGTATTTTTCAGTGGATCGTTTGCCGCAATCTTTTGGTTGAAGA 61561 |||| | |||||||| | || ||| || || ||||| | ||||| ||| | |||| Sbjct 161251 TTGCCGCCGTCGAGGGCATCTTCTTCTCGGGCTCCTTTGCGTCCATCTTCTGGCTCAAGA 161310 Query 61562 AACGTGGACTTATGCCCGGTCTGACCTTCAGCAATGAGTTGATATCACGCGACGAGGGCA 61621 | || || || |||||||| || |||||| ||| ||| | || ||||||||||| | Sbjct 161311 AGCGCGGTCTCATGCCCGGCCTCACCTTCTCCAACGAGCTCATCAGCCGCGACGAGGGGA 161370 Query 61622 TGCATTGTGATTTTGCTGTTTTGCTATTCAAACGCTATCTGGTGAATCGTCCGTCGGA-- 61679 |||| || ||||| |||| |||| || | | | || || | || | Sbjct 161371 TGCACACCGACTTTGCATGCCTGCTCTTCA---GCCACC---TCAAGCGCCGCGCGCACC 161424 Query 61680 -GGAGCGTGTGGGTGAGATTGTTCGTGAGGCGGTAACTATCGAACAGGAATTTCTGACTG 61738 || || | || | || || || | ||||| ||||| || || || | Sbjct 161425 CCGACACCGTCCGCCGCATCATCACGGACGCCGTCGCCATCGAGCAGGAGTTCCTCACGG 161484 Query 61739 ACGCTTTGCCCGT-CTCACTCATCGGCATGAATTGTGGACTAATGTCGCAGTATATTGAA 61797 | || | ||||| | |||||||||||||| | | || |||| ||||| || || Sbjct 161485 AAGCGCT-CCCGTGCAAGCTCATCGGCATGAACTCGGACCTCATGTGCCAGTACATCGAG 161543 Query 61798 TTTGTTGCCGACCGTCTGTTGGTCGATTTGGGTATGAAGCGGATCTATAATACGAAAAAC 61857 || || || ||||| ||| | || | || | | | | || || | ||| Sbjct 161544 TTCGTCGCGGACCGCCTGCTCGTGTCCCTCGGAAACGACAAGGTGTACAACGTCACGAAC 161603 Query 61858 CCATTTGATTTCATGGACATGATTTCGCTGGATGGCAAGACGAATTTTTTCGAGAAACGT 61917 || || || |||||||||||||| || ||| | ||||||||||| || |||||||| || Sbjct 161604 CCCTTCGACTTCATGGACATGATCTCCCTGCAGGGCAAGACGAACTTCTTCGAGAAGCGC 161663 Query 61918 GT 61919 || Sbjct 161664 GT 161665 >seq362 Length=48712 Score = 185 bits (204), Expect = 7e-42 Identities = 555/845 (66%), Gaps = 19/845 (2%) Strand=Plus/Minus Query 61087 ATTTGGCGCATGTACAAAAAGGCGGAAGCTTCCTTCTGGACGGTGGAGGAGGTCGATTTG 61146 || |||| |||||||| ||||| || ||||| |||||||| | |||| || | || || Sbjct 46493 ATCTGGCAAATGTACAAGAAGGCCGAGGCTTCTTTCTGGACAGCGGAGAAGATGGACCTG 46434 Query 61147 TCCAAAGACATGAATGACTGGGAGC----GTTTATCGAGCGGTGAACAACATTTCATTAA 61202 ||||| |||||| |||||| | | | | ||| | |||| || ||||| Sbjct 46433 TCCAAGGACATGGTCGACTGGAACACCCAGCTCAACGA-CAACGAACGTCACTTCATCTC 46375 Query 61203 ACATGTGTTGGCGTTCTTTGCCGCTTCGGACGGTATCGTCAATGAGAATTTATTGGAACG 61262 || || | || ||||| || || ||||| | |||||||| ||||| | | || || Sbjct 46374 CCACGTCCTCGCCTTCTTCGCTGCGTCGGATAGCATCGTCAACGAGAACCTCGTTGAGCG 46315 Query 61263 TTTCGCGCAGGAGGTGCAAGTGTCGGAGGCGCGTTGTTTCTACGGCTTCCAGATTGCCAT 61322 ||| || | ||||| |||| | ||||| || || |||||||||||||||| || Sbjct 46314 GTTCTCGAACGAGGTCCAAGCCGCCGAGGCCCGCTGCTTCTACGGCTTCCAGACCATGAT 46255 Query 61323 GGAGAATGTCCACTCGGAGATGTACAGTGTTCTCATCGATACGTACATCAGGGAGCGGGC 61382 ||| | | ||||| |||| ||| ||||| ||||| ||||||| ||| | || Sbjct 46254 GGACACCATTCACTCCGAGACCTAC---TCCCTCATTGATACCTACATCACGGACCCCGC 46198 Query 61383 GGAACGTGAACGATTGTTCAATGCCATCGAGACGATACCGGCGGTGAAGCGGAAAGCGGA 61442 | || || | ||| | ||| ||||||| || ||| | ||| ||| || || Sbjct 46197 ACAGCGCGAGTACCTCTTCGACGCCGTCGAGACCATCCCGTGCATCAAGAAGAAGGCCGA 46138 Query 61443 TTGGGCCTTCAATTGGATCAC-CAGTACAACGGCTACATTTGGTGAACGATTGCTGGCAT 61501 |||||| | || |||||| | | |||| | | || || | ||| || | | || | Sbjct 46137 CTGGGCCATGAAGTGGATCTCAGATGACAA-GTCCACCTTCGCTGAGCGCCTCGTCGCCT 46079 Query 61502 TTGCGGTGGTCGAGGGTGTATTTTTCAGTGGATCGTTTGCCGCAATCTTTTGGTTGAAGA 61561 ||| ||| |||| | |||||| || || || || | ||||| ||| | |||| Sbjct 46078 TTGTCACCGTCAAGGGCATCTTTTTCTCGGGCTCCTTCGCATCGATCTTCTGGCTCAAGA 46019 Query 61562 AACGTGGACTTATGCCCGGTCTGACCTTCAGCAATGAGTTGATATCACGCGACGAGGGCA 61621 |||| || || |||||||| || |||||| || ||| | || ||||||||||| | Sbjct 46018 AACGCGGTCTCATGCCCGGCCTCACCTTCTCCACCGAGCTCATCAGCCGCGACGAGGGGA 45959 Query 61622 TGCATTGTGATTTTGCTGTTTTGCTATTCAAACGCTATCTGGTGAATCGTCCGTCGGAGG 61681 |||| || ||||| |||| |||| || | || | | | || || | Sbjct 45958 TGCACACCGACTTTGCATGCCTGCTCTTCA---GCCACCTCGAGCACCGCGCGCATCCCG 45902 Query 61682 AGCGTGTGGGTGAGATTGTTCGTGAGGCGGTAACTATCGAACAGGAATTTCTGACTGACG 61741 | || | || | || || || | || || ||||| || || || || | Sbjct 45901 ACACCGTCCGCCGCATCATCACGGACGCCGTCGCCATTGAGCAGGAGTTCCTCACGGAAG 45842 Query 61742 CTTTGCCCGTCTCA-CTCATCGGCATGAATTGTGGACTAATGTCGCAGTATATTGAATTT 61800 | ||||| | | |||||||||||||| | | || |||| ||||| || | || Sbjct 45841 -TGCTCCCGTGTAAGCTCATCGGCATGAACTCGGACCTCATGTGCCAGTACATCAAGTTC 45783 Query 61801 GTTGCCGACCGTCTGTTGGT-CGATTTGGGTATGAAGCGGATCTATAATACGAAAAACCC 61859 | || ||||| ||| | || | ||| | || || | || ||| | ||| || Sbjct 45782 TTCGCGGACCGCCTGCTCGTGTCCCTCGGGAACGACAAGG-TGTACAATGTCACAAATCC 45724 Query 61860 ATTTGATTTCATGGACATGATTTCGCTGGATGGCAAGACGAATTTTTTCGAGAAA--CGT 61917 ||||| ||| |||| |||||||| ||| | ||||||||||| ||| |||||||| ||| Sbjct 45723 CTTTGACTTCGTGGATATGATTTCCCTGCAGGGCAAGACGAACTTTCTCGAGAAAGGCGT 45664 Query 61918 GTAGG 61922 || || Sbjct 45663 GTCGG 45659 >seq92 Length=307622 Score = 129 bits (142), Expect = 5e-25 Identities = 167/231 (72%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 66344 AATAGATCAGGTATCCAGAGGGCGTAGAAGAGATCGCGTGCTCGTTGCTCCTCAATGCCG 66403 || ||||| || ||||| | || ||||| | ||| || || || | |||||| ||||| Sbjct 60066 AAGAGATCCGGGATCCACAAAGCATAGAACAAATCACGGGCACGGTTCTCCTCCTTGCCG 60007 Query 66404 TGATTTTTGCGCAAGTCGAGGAACTCAAAGATGTCGGCATGCCATGGTTCCAGGTAGATG 66463 || || || | | ||||| ||| || |||||||| | |||||||| ||||||||||| Sbjct 60006 TGGTTCTTCCTGAGGTCGATGAAATCGAAGATGTCATCGTGCCATGGCTCCAGGTAGATA 59947 Query 66464 GCGAACGAGCCCATACGTTTGCCGCCACCTTGGTCGACGTAGCGAGCGACATTGTTGAAG 66523 ||||| | ||| || ||| ||| |||||||| ||||| || ||| || ||| Sbjct 59946 GCGAAAGCGCCGGGGCGCTTGTTGCCTCCTTGGTCTACGTAACGCGCGGTGGCGTCAAAG 59887 Query 66524 ACACGCAACATCGGTACGAGCCCGTTAGATTTGCCATTGGTGCCGTCGATG 66574 | |||| ||| || || | ||||| || | ||||||||||| ||||| Sbjct 59886 GCGCGCAGCATGGGGACAATGCCGTTTGAATATCCATTGGTGCCCGCGATG 59836 Score = 86.0 bits (94), Expect = 5e-12 Identities = 226/339 (67%), Gaps = 6/339 (2%) Strand=Plus/Minus Query 66587 GCCCGTATATCGTGAACATTCAGACCAATACCACCGGCCGTCTTCGAGATGGCAGCACAA 66646 ||||| |||| ||| | ||||| ||||| ||||| || || || ||| ||||| Sbjct 59774 GCCCGAATATTGTGGATGTTCAGCCCAATGCCACCAGCGGTTTTGCTGATCATGGCACAG 59715 Query 66647 -TCGGCCAC-TGTCCGGAATATGCCGTCAATGGAGTCACCCTTGATGGTCAGGAGGTAGC 66704 || | |||| | | ||||| |||||| ||| | || |||| | |||| ||| Sbjct 59714 CTCTTGAGCGTGTC--GTAGATGCCTTCAATGCTGTCGTCTTTCATGGCGATGAGGAAGC 59657 Query 66705 ATGAACTA-AGTTGGGGTTTGGGTGTGGCGGCCGAGAAGAGGGTGGGTGTAGCGTGCGTA 66763 | | | | | ||| || | |||||| |||| |||||| ||||| | |||||||| Sbjct 59656 A-GCTCGACATTTGCGGGTGCGGTGTGCCGGCGTTGAAGAGCGTGGGGGATGCGTGCGTG 59598 Query 66764 AAGTAATGGCGAGACATGTAATTGTACGTCTCGATGACAGCATCAATGTTTTCGCCATGA 66823 |||||| | |||||| ||||||||||||| ||| || | || || || Sbjct 59597 AAGTAACGTTCAGACATCATGTTGTACGTCTCGAGGACGTGCTCGAGGTCAGAACCGTGG 59538 Query 66824 ATCCCGAGTGCACATCGCATCAGGAGGTATTGAGGCCGTTCGACCAGCCGATCCTTGATA 66883 || || | || ||||| || | || ||| || || ||| ||| || | |||||| Sbjct 59537 ATACCAACGGCGACCCGCATGAGCAAGTGTTGCGGACGCTCGGCCACGCGGCCATTGATA 59478 Query 66884 TGCATTAAGTAGGAGCGTTCCAGGGTCTTGATACCAAAG 66922 | | | |||||| || |||| ||||||| ||| ||| Sbjct 59477 CGGAGAAGGTAGGATCGCTCCAAAGTCTTGAAACCGAAG 59439 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397558725980960