Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Flammulina_20velutipes_20[genbank_20GCA_5F001602335.1_202016-03-10] 5,130 sequences; 34,792,959 total letters Query= AAMG01000278.1 Length=318 Score E Sequences producing significant alignments: (Bits) Value seq58 327 2e-87 >seq58 Length=6004 Score = 327 bits (362), Expect = 2e-87 Identities = 257/305 (84%), Gaps = 2/305 (1%) Strand=Plus/Minus Query 15 GGGCCTTTCCTTCTGGGGATCC-GCATGCCCTTCACTGGGTGTGCCGGGGAGCCAGGACT 73 ||| ||| ||| ||| || || || || |||| | ||| || | ||||| |||||||| Sbjct 6001 GGGTCTTACCTCTTGGTGAGCCAGCGTGGCCTTTATTGGTTGCGTTGGGGAACCAGGACT 5942 Query 74 TTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTCGAATACATTAGCATGGA 133 ||||| |||| |||||||||||||||||||||||||| || ||||||||||||||||| Sbjct 5941 TTTACCTTGAGAAAATTAGAGTGTTCAAAGCAGGCCTATGTCTGAATACATTAGCATGGA 5882 Query 134 ATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACCGCCGTAATGATTAA 193 |||||||||||||||||||| | ||||||||||||||||||| ||||||||||||||| Sbjct 5881 ATAATAGAATAGGACGTGCGATCCTATTTTGTTGGTTTCTAGAGTCGCCGTAATGATTAA 5822 Query 194 TAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGGATTTATTGA 253 |||||||||| ||||| | ||||| | | | |||||||||||||||||||| | | | Sbjct 5821 TAGGGATAGTTGGGGGCATTGGTATTGAGTCGCTAGAGGTGAAATTCTTGGATTGACTCA 5762 Query 254 AGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTGAACGAAAGTT 313 |||| ||||| ||||||||| || |||||||||||||||||||||| ||||||| ||| Sbjct 5761 AGACCAACTATTGCGAAAGCATTTGCCAAGGATGTTTTCATTAATCA-AGAACGAAGGTT 5703 Query 314 AGGGG 318 ||||| Sbjct 5702 AGGGG 5698 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 915153050240