Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Flammulina_20velutipes_20[genbank_20GCA_5F001602335.1_202016-03-10] 5,130 sequences; 34,792,959 total letters Query= AAMG01000304.1 Length=683 Score E Sequences producing significant alignments: (Bits) Value seq58 473 5e-131 >seq58 Length=6004 Score = 473 bits (524), Expect = 5e-131 Identities = 513/679 (76%), Gaps = 41/679 (6%) Strand=Plus/Minus Query 40 GAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTTCTAAAGCTAAAT 99 |||||| |||||||||||||||||| ||||||||| |||||||| | ||||||||||||| Sbjct 3901 GAGTCGTGTTGTTTGGGAATGCAGCACTAAATGGGTGGTAAATTCCATCTAAAGCTAAAT 3842 Query 100 ATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACTTTGGAA 159 |||||| ||||||||||||| ||||||| |||| ||||||||||||| ||||||||| Sbjct 3841 ATTGGCGAGAGACCGATAGCAAACAAGTACCGTGAGGGAAAGATGAAAAGAACTTTGGAA 3782 Query 160 AGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGCGCTTGCAA-CCAGACTTGCCC 218 ||||||||||| || |||||||||||||||||||||| ||||| | |||| | | | Sbjct 3781 AGAGAGTTAAACAGTACGTGAAATTGTTGAAAGGGAAACGCTTAAAGTCCAGTCGCGTCG 3722 Query 219 GCAGTTGCTCAACCGGCCCCTCGGCC--GGTGCACTCTTCTGCGGTCAGGCCAGCATCAG 276 | | ||| | | ||| | | | ||| | || | | || ||||||||| Sbjct 3721 GTTGGGAATCAGTCTCGCTCTCTTGCTTGACGTACTTCCCAGCTGACGGGTCAGCATCAG 3662 Query 277 CTCGGGCGGTCGGATAAAGGCCCCGGGAATGTGGCCCCCTTCGGGGGGTGTTATAGCCCG 336 | | || ||||||||| |||||||||| || |||||| | |||||||||| Sbjct 3661 TTTTGATCGTTGGATAAAGGTTGGAGGAATGTGGCACC-TTCGGGTG-TGTTATAGCCTC 3604 Query 337 GGGTGGAATGCGGCCCGCCTGGACTGAGG---TCCGCGCTCCG----------------- 376 | | | || | | | ||||||||| || || | ||| Sbjct 3603 TGATTGTATACAACG-GTTGGGACTGAGGAACTCAGCACGCCGAAAGGCCGGGTACTTGT 3545 Query 377 -----------GCT-AGGATGCTGGCGTAATGGTTGTAAGCGGCCCGTCTTGGAACACGG 424 ||| ||||||||||| |||||| | ||| || ||||||||| ||||||| Sbjct 3544 ACCACGTACGTGCTTAGGATGCTGGCATAATGGCTTTAATCGACCCGTCTTGAAACACGG 3485 Query 425 ACCAAGGAGTCTAACATCTATGCGAGTGTTTGGGTGTCAAACCCGTGCGCGTAATGAAAG 484 ||||||||||||||||| ||||||| |||||||| ||||||| | ||| |||||||| Sbjct 3484 ACCAAGGAGTCTAACATGCCTGCGAGTATTTGGGTGGAAAACCCGAGTGCGCAATGAAAG 3425 Query 485 TGAACGGAGGTGGGAACCCGTGAGGGTGCACCATCGACCGATCCTGATGTCTTCGGATGG 544 |||| || || |||| | | || ||||| | || ||| || || || || || || Sbjct 3424 TGAA---AGTTGAGAACTCTTTAGAGTGCATCGACGCCCGGACCAGACGTTCTCTGACGG 3368 Query 545 ATTTGAGTAAGAGCATAGCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGT 604 || | | ||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct 3367 ATCCGCGGTAGAGCATGTATGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGT 3308 Query 605 GAAGCCAGAGGAAACTCTGGTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCA 664 |||||||||||||||||||||||||||||| |||| ||||| ||||||||||||||||| Sbjct 3307 GAAGCCAGAGGAAACTCTGGTGGAGGCTCGTAGCGATTCTGACGTGCAAATCGATCGTCG 3248 Query 665 AATTTGGGTATAGGGGCGA 683 ||||||||||||||||||| Sbjct 3247 AATTTGGGTATAGGGGCGA 3229 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 2079889961500