Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Flammulina_20velutipes_20[genbank_20GCA_5F001602335.1_202016-03-10]
5,130 sequences; 34,792,959 total letters
Query= AAMG01000304.1
Length=683
Score E
Sequences producing significant alignments: (Bits) Value
seq58 473 5e-131
>seq58
Length=6004
Score = 473 bits (524), Expect = 5e-131
Identities = 513/679 (76%), Gaps = 41/679 (6%)
Strand=Plus/Minus
Query 40 GAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTTCTAAAGCTAAAT 99
|||||| |||||||||||||||||| ||||||||| |||||||| | |||||||||||||
Sbjct 3901 GAGTCGTGTTGTTTGGGAATGCAGCACTAAATGGGTGGTAAATTCCATCTAAAGCTAAAT 3842
Query 100 ATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACTTTGGAA 159
|||||| ||||||||||||| ||||||| |||| ||||||||||||| |||||||||
Sbjct 3841 ATTGGCGAGAGACCGATAGCAAACAAGTACCGTGAGGGAAAGATGAAAAGAACTTTGGAA 3782
Query 160 AGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGCGCTTGCAA-CCAGACTTGCCC 218
||||||||||| || |||||||||||||||||||||| ||||| | |||| | | |
Sbjct 3781 AGAGAGTTAAACAGTACGTGAAATTGTTGAAAGGGAAACGCTTAAAGTCCAGTCGCGTCG 3722
Query 219 GCAGTTGCTCAACCGGCCCCTCGGCC--GGTGCACTCTTCTGCGGTCAGGCCAGCATCAG 276
| | ||| | | ||| | | | ||| | || | | || |||||||||
Sbjct 3721 GTTGGGAATCAGTCTCGCTCTCTTGCTTGACGTACTTCCCAGCTGACGGGTCAGCATCAG 3662
Query 277 CTCGGGCGGTCGGATAAAGGCCCCGGGAATGTGGCCCCCTTCGGGGGGTGTTATAGCCCG 336
| | || ||||||||| |||||||||| || |||||| | ||||||||||
Sbjct 3661 TTTTGATCGTTGGATAAAGGTTGGAGGAATGTGGCACC-TTCGGGTG-TGTTATAGCCTC 3604
Query 337 GGGTGGAATGCGGCCCGCCTGGACTGAGG---TCCGCGCTCCG----------------- 376
| | | || | | | ||||||||| || || | |||
Sbjct 3603 TGATTGTATACAACG-GTTGGGACTGAGGAACTCAGCACGCCGAAAGGCCGGGTACTTGT 3545
Query 377 -----------GCT-AGGATGCTGGCGTAATGGTTGTAAGCGGCCCGTCTTGGAACACGG 424
||| ||||||||||| |||||| | ||| || ||||||||| |||||||
Sbjct 3544 ACCACGTACGTGCTTAGGATGCTGGCATAATGGCTTTAATCGACCCGTCTTGAAACACGG 3485
Query 425 ACCAAGGAGTCTAACATCTATGCGAGTGTTTGGGTGTCAAACCCGTGCGCGTAATGAAAG 484
||||||||||||||||| ||||||| |||||||| ||||||| | ||| ||||||||
Sbjct 3484 ACCAAGGAGTCTAACATGCCTGCGAGTATTTGGGTGGAAAACCCGAGTGCGCAATGAAAG 3425
Query 485 TGAACGGAGGTGGGAACCCGTGAGGGTGCACCATCGACCGATCCTGATGTCTTCGGATGG 544
|||| || || |||| | | || ||||| | || ||| || || || || || ||
Sbjct 3424 TGAA---AGTTGAGAACTCTTTAGAGTGCATCGACGCCCGGACCAGACGTTCTCTGACGG 3368
Query 545 ATTTGAGTAAGAGCATAGCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGT 604
|| | | ||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct 3367 ATCCGCGGTAGAGCATGTATGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGT 3308
Query 605 GAAGCCAGAGGAAACTCTGGTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCA 664
|||||||||||||||||||||||||||||| |||| ||||| |||||||||||||||||
Sbjct 3307 GAAGCCAGAGGAAACTCTGGTGGAGGCTCGTAGCGATTCTGACGTGCAAATCGATCGTCG 3248
Query 665 AATTTGGGTATAGGGGCGA 683
|||||||||||||||||||
Sbjct 3247 AATTTGGGTATAGGGGCGA 3229
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 2079889961500
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |