Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Flammulina_20velutipes_20[genbank_20GCA_5F001602335.1_202016-03-10]
5,130 sequences; 34,792,959 total letters
Query= AAMG01001634.1
Length=217
Score E
Sequences producing significant alignments: (Bits) Value
seq58 210 3e-52
seq59 111 2e-22
>seq58
Length=6004
Score = 210 bits (232), Expect = 3e-52
Identities = 146/162 (90%), Gaps = 4/162 (2%)
Strand=Plus/Plus
Query 1 CGTCTCTAGAAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGT 60
|| |||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct 5835 CGACTCTAGAAACCAACAAAATAGGATCGCACGTCCTATTCTATTATTCCATGCTAATGT 5894
Query 61 ATTCGGGCGTAAGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAGTCCTGGTTCCT 120
|||| | | || |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 5895 ATTCAGACATAGGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAGTCCTGGTTCCC 5954
Query 121 C--CGCACACCAATGAAGG-CATACGGGCTCACCAAGAGGTA 159
| |||| |||||| |||| || | ||||||||||||||||
Sbjct 5955 CAACGCA-ACCAATAAAGGCCACGCTGGCTCACCAAGAGGTA 5995
>seq59
Length=172
Score = 111 bits (122), Expect = 2e-22
Identities = 94/112 (84%), Gaps = 4/112 (4%)
Strand=Plus/Minus
Query 87 CTCTAATTTTCTCAAGGTAAAAGTCCTGGTTCCTC--CGCACACCAATGAAGG-CATACG 143
||||||||||||||||||||||||||||||||| | |||| |||||| |||| || |
Sbjct 172 CTCTAATTTTCTCAAGGTAAAAGTCCTGGTTCCCCAACGCA-ACCAATAAAGGCCACGCT 114
Query 144 GGCTCACCAAGAGGTAGGGCTGGGTAATGCAGTACTCGCCGTGAGGCGGACC 195
|||||||||||||||| | | || | |||||| ||||||||||||||||
Sbjct 113 GGCTCACCAAGAGGTAAGACCCAGTCAGACAGTACACGCCGTGAGGCGGACC 62
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 595170420420
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |