Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Flammulina_20velutipes_20[genbank_20GCA_5F001602335.1_202016-03-10] 5,130 sequences; 34,792,959 total letters Query= AAMG01001634.1 Length=217 Score E Sequences producing significant alignments: (Bits) Value seq58 210 3e-52 seq59 111 2e-22 >seq58 Length=6004 Score = 210 bits (232), Expect = 3e-52 Identities = 146/162 (90%), Gaps = 4/162 (2%) Strand=Plus/Plus Query 1 CGTCTCTAGAAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGT 60 || |||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct 5835 CGACTCTAGAAACCAACAAAATAGGATCGCACGTCCTATTCTATTATTCCATGCTAATGT 5894 Query 61 ATTCGGGCGTAAGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAGTCCTGGTTCCT 120 |||| | | || ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 5895 ATTCAGACATAGGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAGTCCTGGTTCCC 5954 Query 121 C--CGCACACCAATGAAGG-CATACGGGCTCACCAAGAGGTA 159 | |||| |||||| |||| || | |||||||||||||||| Sbjct 5955 CAACGCA-ACCAATAAAGGCCACGCTGGCTCACCAAGAGGTA 5995 >seq59 Length=172 Score = 111 bits (122), Expect = 2e-22 Identities = 94/112 (84%), Gaps = 4/112 (4%) Strand=Plus/Minus Query 87 CTCTAATTTTCTCAAGGTAAAAGTCCTGGTTCCTC--CGCACACCAATGAAGG-CATACG 143 ||||||||||||||||||||||||||||||||| | |||| |||||| |||| || | Sbjct 172 CTCTAATTTTCTCAAGGTAAAAGTCCTGGTTCCCCAACGCA-ACCAATAAAGGCCACGCT 114 Query 144 GGCTCACCAAGAGGTAGGGCTGGGTAATGCAGTACTCGCCGTGAGGCGGACC 195 |||||||||||||||| | | || | |||||| |||||||||||||||| Sbjct 113 GGCTCACCAAGAGGTAAGACCCAGTCAGACAGTACACGCCGTGAGGCGGACC 62 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 595170420420