Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Flammulina_20velutipes_20[genbank_20GCA_5F001602335.1_202016-03-10]
5,130 sequences; 34,792,959 total letters
Query= AAMG01002186.1
Length=328
Score E
Sequences producing significant alignments: (Bits) Value
seq58 443 4e-122
>seq58
Length=6004
Score = 443 bits (490), Expect = 4e-122
Identities = 287/311 (92%), Gaps = 3/311 (1%)
Strand=Plus/Minus
Query 20 GAGCGAGACCTTAACCTGCTAAATAGCCAGGCCCGCTTTGGCGGGTCGCCGGCTTCTTAG 79
|| ||||||||||||||||||||||| |||||| ||||| || |||||||| ||||||||
Sbjct 5360 GAACGAGACCTTAACCTGCTAAATAGTCAGGCCGGCTTTTGCTGGTCGCCGACTTCTTAG 5301
Query 80 AGGGACTATCGGC-TCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTGATGCCCTT 138
||||||| || || || ||| || ||||||||||||||||||||||||||||||||||||
Sbjct 5300 AGGGACTGTCAGCGTCTAGCTGACGGAAGTTTGAGGCAATAACAGGTCTGTGATGCCCTT 5241
Query 139 AGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCACCTTGGCC 198
|||||||||||||||||||||||||||||||||||||||| ||||||| |||||||| ||
Sbjct 5240 AGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAGCGAGTTC-TCACCTTGTCC 5182
Query 199 GGAAGGT-CTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTGCAATTAT 257
| ||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct 5181 GAAAGGTACTGGGTAATCTTGTGAAACTCTGTCGTGCTGGGGATAGAGCATTGCAATTAT 5122
Query 258 TGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATTACGTCCC 317
|||||||||||||||||| ||||||||||| ||||||||| ||||||||||||||||
Sbjct 5121 TGCTCTTCAACGAGGAATACCTAGTAAGCGTAAGTCATCAGCTTGCGTTGATTACGTCCC 5062
Query 318 TGCCCTTTGTA 328
|||||||||||
Sbjct 5061 TGCCCTTTGTA 5051
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 947151408640
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |