Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fomitopsis_20palustris_20[genbank_20GCA_5F001937815.1_202017-01-06]
226 sequences; 43,856,698 total letters
Query= AAMG01000185.1
Length=266
Score E
Sequences producing significant alignments: (Bits) Value
seq131 284 2e-74
seq105 284 2e-74
seq66 284 2e-74
seq39 284 2e-74
>seq131
Length=6970
Score = 284 bits (314), Expect = 2e-74
Identities = 204/231 (88%), Gaps = 3/231 (1%)
Strand=Plus/Plus
Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60
|||||||||||||||||||| |||||||||||| |||||||| ||||||||||| ||| |
Sbjct 3039 GTACAAAGGGCAGGGACGTAATCAACGCGAGCT-GATGACTCACGCTTACTAGGTATT-C 3096
Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCA-AAGATT 119
||||||||||| ||| |||||||||| |||||||||| ||||| | ||||| ||||||
Sbjct 3097 CTCGTTGAAGAGCAATAATTGCAATGCTCTATCCCCAGCACGACAGAGTTTCACAAGATT 3156
Query 120 ACCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCG 179
|||| ||||| ||||||||| | | ||||| || | |||||||||||||||||||
Sbjct 3157 ACCCAGACCTTCCGGCCAAGGAAAAAAACTCGCTGGCTCTGTCAGTGTAGCGCGCGTGCG 3216
Query 180 GCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCGT 230
|||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3217 GCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCGT 3267
>seq105
Length=13580
Score = 284 bits (314), Expect = 2e-74
Identities = 204/231 (88%), Gaps = 3/231 (1%)
Strand=Plus/Plus
Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60
|||||||||||||||||||| |||||||||||| |||||||| ||||||||||| ||| |
Sbjct 12757 GTACAAAGGGCAGGGACGTAATCAACGCGAGCT-GATGACTCACGCTTACTAGGTATT-C 12814
Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCA-AAGATT 119
||||||||||| ||| |||||||||| |||||||||| ||||| | ||||| ||||||
Sbjct 12815 CTCGTTGAAGAGCAATAATTGCAATGCTCTATCCCCAGCACGACAGAGTTTCACAAGATT 12874
Query 120 ACCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCG 179
|||| ||||| ||||||||| | | ||||| || | |||||||||||||||||||
Sbjct 12875 ACCCAGACCTTCCGGCCAAGGAAAAAAACTCGCTGGCTCTGTCAGTGTAGCGCGCGTGCG 12934
Query 180 GCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCGT 230
|||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 12935 GCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCGT 12985
>seq66
Length=25538
Score = 284 bits (314), Expect = 2e-74
Identities = 204/231 (88%), Gaps = 3/231 (1%)
Strand=Plus/Plus
Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60
|||||||||||||||||||| |||||||||||| |||||||| ||||||||||| ||| |
Sbjct 10282 GTACAAAGGGCAGGGACGTAATCAACGCGAGCT-GATGACTCACGCTTACTAGGTATT-C 10339
Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCA-AAGATT 119
||||||||||| ||| |||||||||| |||||||||| ||||| | ||||| ||||||
Sbjct 10340 CTCGTTGAAGAGCAATAATTGCAATGCTCTATCCCCAGCACGACAGAGTTTCACAAGATT 10399
Query 120 ACCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCG 179
|||| ||||| ||||||||| | | ||||| || | |||||||||||||||||||
Sbjct 10400 ACCCAGACCTTCCGGCCAAGGAAAAAAACTCGCTGGCTCTGTCAGTGTAGCGCGCGTGCG 10459
Query 180 GCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCGT 230
|||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 10460 GCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCGT 10510
Score = 277 bits (306), Expect = 3e-72
Identities = 203/231 (88%), Gaps = 4/231 (2%)
Strand=Plus/Plus
Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60
|||||||||||||| ||||| |||||||||||| |||||||| ||||||||||| ||| |
Sbjct 677 GTACAAAGGGCAGG-ACGTAATCAACGCGAGCT-GATGACTCACGCTTACTAGGTATT-C 733
Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCA-AAGATT 119
||||||||||| ||| |||||||||| |||||||||| ||||| | ||||| ||||||
Sbjct 734 CTCGTTGAAGAGCAATAATTGCAATGCTCTATCCCCAGCACGACAGAGTTTCACAAGATT 793
Query 120 ACCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCG 179
|||| ||||| ||||||||| | | ||||| || | |||||||||||||||||||
Sbjct 794 ACCCAGACCTTCCGGCCAAGGAAAAAAACTCGCTGGCTCTGTCAGTGTAGCGCGCGTGCG 853
Query 180 GCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCGT 230
|||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 854 GCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCGT 904
>seq39
Length=37533
Score = 284 bits (314), Expect = 2e-74
Identities = 204/231 (88%), Gaps = 3/231 (1%)
Strand=Plus/Plus
Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60
|||||||||||||||||||| |||||||||||| |||||||| ||||||||||| ||| |
Sbjct 3039 GTACAAAGGGCAGGGACGTAATCAACGCGAGCT-GATGACTCACGCTTACTAGGTATT-C 3096
Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCA-AAGATT 119
||||||||||| ||| |||||||||| |||||||||| ||||| | ||||| ||||||
Sbjct 3097 CTCGTTGAAGAGCAATAATTGCAATGCTCTATCCCCAGCACGACAGAGTTTCACAAGATT 3156
Query 120 ACCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCG 179
|||| ||||| ||||||||| | | ||||| || | |||||||||||||||||||
Sbjct 3157 ACCCAGACCTTCCGGCCAAGGAAAAAAACTCGCTGGCTCTGTCAGTGTAGCGCGCGTGCG 3216
Query 180 GCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCGT 230
|||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3217 GCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCGT 3267
Score = 284 bits (314), Expect = 2e-74
Identities = 204/231 (88%), Gaps = 3/231 (1%)
Strand=Plus/Plus
Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60
|||||||||||||||||||| |||||||||||| |||||||| ||||||||||| ||| |
Sbjct 12656 GTACAAAGGGCAGGGACGTAATCAACGCGAGCT-GATGACTCACGCTTACTAGGTATT-C 12713
Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCA-AAGATT 119
||||||||||| ||| |||||||||| |||||||||| ||||| | ||||| ||||||
Sbjct 12714 CTCGTTGAAGAGCAATAATTGCAATGCTCTATCCCCAGCACGACAGAGTTTCACAAGATT 12773
Query 120 ACCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCG 179
|||| ||||| ||||||||| | | ||||| || | |||||||||||||||||||
Sbjct 12774 ACCCAGACCTTCCGGCCAAGGAAAAAAACTCGCTGGCTCTGTCAGTGTAGCGCGCGTGCG 12833
Query 180 GCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCGT 230
|||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 12834 GCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCGT 12884
Score = 284 bits (314), Expect = 2e-74
Identities = 204/231 (88%), Gaps = 3/231 (1%)
Strand=Plus/Plus
Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60
|||||||||||||||||||| |||||||||||| |||||||| ||||||||||| ||| |
Sbjct 22273 GTACAAAGGGCAGGGACGTAATCAACGCGAGCT-GATGACTCACGCTTACTAGGTATT-C 22330
Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCA-AAGATT 119
||||||||||| ||| |||||||||| |||||||||| ||||| | ||||| ||||||
Sbjct 22331 CTCGTTGAAGAGCAATAATTGCAATGCTCTATCCCCAGCACGACAGAGTTTCACAAGATT 22390
Query 120 ACCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCG 179
|||| ||||| ||||||||| | | ||||| || | |||||||||||||||||||
Sbjct 22391 ACCCAGACCTTCCGGCCAAGGAAAAAAACTCGCTGGCTCTGTCAGTGTAGCGCGCGTGCG 22450
Query 180 GCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCGT 230
|||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 22451 GCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCGT 22501
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 751998353590
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |