Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fomitopsis_20palustris_20[genbank_20GCA_5F001937815.1_202017-01-06]
226 sequences; 43,856,698 total letters
Query= AAMG01000190.1
Length=117
Score E
Sequences producing significant alignments: (Bits) Value
seq131 156 2e-36
seq105 156 2e-36
seq66 156 2e-36
seq39 156 2e-36
>seq131
Length=6970
Score = 156 bits (172), Expect = 2e-36
Identities = 107/119 (90%), Gaps = 4/119 (3%)
Strand=Plus/Plus
Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCA--AAATGATAACATCGC 58
||||||||||||||||||||||||||||||||||||||| || |||| | | ||||
Sbjct 3567 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGACACATCAAAT--TGAGGTCGC 3624
Query 59 CCGATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117
||||||||||||||||||||||||| ||||||||||| ||||||||||||||| |||||
Sbjct 3625 CCGATCCCTAGTCGGCATAGTTTACTGTTAAGACTACAACGGTATCTGATCGTTTTCGA 3683
>seq105
Length=13580
Score = 156 bits (172), Expect = 2e-36
Identities = 107/119 (90%), Gaps = 4/119 (3%)
Strand=Plus/Plus
Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCA--AAATGATAACATCGC 58
||||||||||||||||||||||||||||||||||||||| || |||| | | ||||
Sbjct 13286 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGACACATCAAAT--TGAGGTCGC 13343
Query 59 CCGATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117
||||||||||||||||||||||||| ||||||||||| ||||||||||||||| |||||
Sbjct 13344 CCGATCCCTAGTCGGCATAGTTTACTGTTAAGACTACAACGGTATCTGATCGTTTTCGA 13402
>seq66
Length=25538
Score = 156 bits (172), Expect = 2e-36
Identities = 107/119 (90%), Gaps = 4/119 (3%)
Strand=Plus/Plus
Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCA--AAATGATAACATCGC 58
||||||||||||||||||||||||||||||||||||||| || |||| | | ||||
Sbjct 1204 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGACACATCAAAT--TGAGGTCGC 1261
Query 59 CCGATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117
||||||||||||||||||||||||| ||||||||||| ||||||||||||||| |||||
Sbjct 1262 CCGATCCCTAGTCGGCATAGTTTACTGTTAAGACTACAACGGTATCTGATCGTTTTCGA 1320
Score = 150 bits (166), Expect = 1e-34
Identities = 104/116 (90%), Gaps = 4/116 (3%)
Strand=Plus/Plus
Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCA--AAATGATAACATCGC 58
||||||||||||||||||||||||||||||||||||||| || |||| | | ||||
Sbjct 10810 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGACACATCAAAT--TGAGGTCGC 10867
Query 59 CCGATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTT 114
||||||||||||||||||||||||| ||||||||||| ||||||||||||||| ||
Sbjct 10868 CCGATCCCTAGTCGGCATAGTTTACTGTTAAGACTACAACGGTATCTGATCGTTTT 10923
>seq39
Length=37533
Score = 156 bits (172), Expect = 2e-36
Identities = 107/119 (90%), Gaps = 4/119 (3%)
Strand=Plus/Plus
Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCA--AAATGATAACATCGC 58
||||||||||||||||||||||||||||||||||||||| || |||| | | ||||
Sbjct 3568 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGACACATCAAAT--TGAGGTCGC 3625
Query 59 CCGATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117
||||||||||||||||||||||||| ||||||||||| ||||||||||||||| |||||
Sbjct 3626 CCGATCCCTAGTCGGCATAGTTTACTGTTAAGACTACAACGGTATCTGATCGTTTTCGA 3684
Score = 156 bits (172), Expect = 2e-36
Identities = 107/119 (90%), Gaps = 4/119 (3%)
Strand=Plus/Plus
Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCA--AAATGATAACATCGC 58
||||||||||||||||||||||||||||||||||||||| || |||| | | ||||
Sbjct 13185 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGACACATCAAAT--TGAGGTCGC 13242
Query 59 CCGATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117
||||||||||||||||||||||||| ||||||||||| ||||||||||||||| |||||
Sbjct 13243 CCGATCCCTAGTCGGCATAGTTTACTGTTAAGACTACAACGGTATCTGATCGTTTTCGA 13301
Score = 150 bits (166), Expect = 1e-34
Identities = 104/116 (90%), Gaps = 4/116 (3%)
Strand=Plus/Plus
Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCA--AAATGATAACATCGC 58
||||||||||||||||||||||||||||||||||||||| || |||| | | ||||
Sbjct 22801 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGACACATCAAAT--TGAGGTCGC 22858
Query 59 CCGATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTT 114
||||||||||||||||||||||||| ||||||||||| ||||||||||||||| ||
Sbjct 22859 CCGATCCCTAGTCGGCATAGTTTACTGTTAAGACTACAACGGTATCTGATCGTTTT 22914
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 278399410140
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |