Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fomitopsis_20palustris_20[genbank_20GCA_5F001937815.1_202017-01-06] 226 sequences; 43,856,698 total letters Query= AAMG01000278.1 Length=318 Score E Sequences producing significant alignments: (Bits) Value seq131 405 9e-111 seq105 405 9e-111 seq66 405 9e-111 seq39 405 9e-111 >seq131 Length=6970 Score = 405 bits (448), Expect = 9e-111 Identities = 279/313 (89%), Gaps = 2/313 (1%) Strand=Plus/Minus Query 7 GTCCGGCCGGGCCTTTCCTTCTGGGGATCCG-CATGCCCTTCACTGGGTGTGCCGGGGAG 65 ||| ||| ||| ||| ||| ||| || ||| ||||| |||||||||||||| |||||| Sbjct 3996 GTCTGGCTGGGTCTTACCTCTTGGTGAGCCGGCATGCTCTTCACTGGGTGTGTCGGGGAA 3937 Query 66 CCAGGACTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTCGAATACATT 125 ||||||||||||| |||| |||||||||||||||||||||||||| ||| |||||||||| Sbjct 3936 CCAGGACTTTTACCTTGAGAAAATTAGAGTGTTCAAAGCAGGCCTGTGCCCGAATACATT 3877 Query 126 AGCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACCGCCGTA 185 |||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||| Sbjct 3876 AGCATGGAATAATAAAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGAGTCGCCGTA 3817 Query 186 ATGATTAATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGGA 245 |||||||||||||||||| ||||| | |||||||| ||| |||||||||||||||||| Sbjct 3816 ATGATTAATAGGGATAGTTGGGGGCATTAGTATTCAGTTGCTAGAGGTGAAATTCTTGGA 3757 Query 246 TTTATTGAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTGAA 305 |||| ||||||||||||||||||||||| || |||||||||||||||||||||| ||| Sbjct 3756 TTTACTGAAGACTAACTACTGCGAAAGCATTTGCCAAGGATGTTTTCATTAATCA-AGAA 3698 Query 306 CGAAAGTTAGGGG 318 |||| |||||||| Sbjct 3697 CGAAGGTTAGGGG 3685 >seq105 Length=13580 Score = 405 bits (448), Expect = 9e-111 Identities = 279/313 (89%), Gaps = 2/313 (1%) Strand=Plus/Minus Query 7 GTCCGGCCGGGCCTTTCCTTCTGGGGATCCG-CATGCCCTTCACTGGGTGTGCCGGGGAG 65 ||| ||| ||| ||| ||| ||| || ||| ||||| |||||||||||||| |||||| Sbjct 4099 GTCTGGCTGGGTCTTACCTCTTGGTGAGCCGGCATGCTCTTCACTGGGTGTGTCGGGGAA 4040 Query 66 CCAGGACTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTCGAATACATT 125 ||||||||||||| |||| |||||||||||||||||||||||||| ||| |||||||||| Sbjct 4039 CCAGGACTTTTACCTTGAGAAAATTAGAGTGTTCAAAGCAGGCCTGTGCCCGAATACATT 3980 Query 126 AGCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACCGCCGTA 185 |||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||| Sbjct 3979 AGCATGGAATAATAAAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGAGTCGCCGTA 3920 Query 186 ATGATTAATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGGA 245 |||||||||||||||||| ||||| | |||||||| ||| |||||||||||||||||| Sbjct 3919 ATGATTAATAGGGATAGTTGGGGGCATTAGTATTCAGTTGCTAGAGGTGAAATTCTTGGA 3860 Query 246 TTTATTGAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTGAA 305 |||| ||||||||||||||||||||||| || |||||||||||||||||||||| ||| Sbjct 3859 TTTACTGAAGACTAACTACTGCGAAAGCATTTGCCAAGGATGTTTTCATTAATCA-AGAA 3801 Query 306 CGAAAGTTAGGGG 318 |||| |||||||| Sbjct 3800 CGAAGGTTAGGGG 3788 Score = 241 bits (266), Expect = 2e-61 Identities = 161/178 (90%), Gaps = 1/178 (1%) Strand=Plus/Minus Query 141 AATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACCGCCGTAATGATTAATAGGGAT 200 ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct 13580 AATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGAGTCGCCGTAATGATTAATAGGGAT 13521 Query 201 AGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGGATTTATTGAAGACTAA 260 ||| ||||| | |||||||| ||| |||||||||||||||||||||| |||||||||| Sbjct 13520 AGTTGGGGGCATTAGTATTCAGTTGCTAGAGGTGAAATTCTTGGATTTACTGAAGACTAA 13461 Query 261 CTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTGAACGAAAGTTAGGGG 318 ||||||||||||| || |||||||||||||||||||||| ||||||| |||||||| Sbjct 13460 CTACTGCGAAAGCATTTGCCAAGGATGTTTTCATTAATCA-AGAACGAAGGTTAGGGG 13404 >seq66 Length=25538 Score = 405 bits (448), Expect = 9e-111 Identities = 279/313 (89%), Gaps = 2/313 (1%) Strand=Plus/Minus Query 7 GTCCGGCCGGGCCTTTCCTTCTGGGGATCCG-CATGCCCTTCACTGGGTGTGCCGGGGAG 65 ||| ||| ||| ||| ||| ||| || ||| ||||| |||||||||||||| |||||| Sbjct 1633 GTCTGGCTGGGTCTTACCTCTTGGTGAGCCGGCATGCTCTTCACTGGGTGTGTCGGGGAA 1574 Query 66 CCAGGACTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTCGAATACATT 125 ||||||||||||| |||| |||||||||||||||||||||||||| ||| |||||||||| Sbjct 1573 CCAGGACTTTTACCTTGAGAAAATTAGAGTGTTCAAAGCAGGCCTGTGCCCGAATACATT 1514 Query 126 AGCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACCGCCGTA 185 |||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||| Sbjct 1513 AGCATGGAATAATAAAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGAGTCGCCGTA 1454 Query 186 ATGATTAATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGGA 245 |||||||||||||||||| ||||| | |||||||| ||| |||||||||||||||||| Sbjct 1453 ATGATTAATAGGGATAGTTGGGGGCATTAGTATTCAGTTGCTAGAGGTGAAATTCTTGGA 1394 Query 246 TTTATTGAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTGAA 305 |||| ||||||||||||||||||||||| || |||||||||||||||||||||| ||| Sbjct 1393 TTTACTGAAGACTAACTACTGCGAAAGCATTTGCCAAGGATGTTTTCATTAATCA-AGAA 1335 Query 306 CGAAAGTTAGGGG 318 |||| |||||||| Sbjct 1334 CGAAGGTTAGGGG 1322 Score = 405 bits (448), Expect = 9e-111 Identities = 279/313 (89%), Gaps = 2/313 (1%) Strand=Plus/Minus Query 7 GTCCGGCCGGGCCTTTCCTTCTGGGGATCCG-CATGCCCTTCACTGGGTGTGCCGGGGAG 65 ||| ||| ||| ||| ||| ||| || ||| ||||| |||||||||||||| |||||| Sbjct 19918 GTCTGGCTGGGTCTTACCTCTTGGTGAGCCGGCATGCTCTTCACTGGGTGTGTCGGGGAA 19859 Query 66 CCAGGACTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTCGAATACATT 125 ||||||||||||| |||| |||||||||||||||||||||||||| ||| |||||||||| Sbjct 19858 CCAGGACTTTTACCTTGAGAAAATTAGAGTGTTCAAAGCAGGCCTGTGCCCGAATACATT 19799 Query 126 AGCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACCGCCGTA 185 |||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||| Sbjct 19798 AGCATGGAATAATAAAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGAGTCGCCGTA 19739 Query 186 ATGATTAATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGGA 245 |||||||||||||||||| ||||| | |||||||| ||| |||||||||||||||||| Sbjct 19738 ATGATTAATAGGGATAGTTGGGGGCATTAGTATTCAGTTGCTAGAGGTGAAATTCTTGGA 19679 Query 246 TTTATTGAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTGAA 305 |||| ||||||||||||||||||||||| || |||||||||||||||||||||| ||| Sbjct 19678 TTTACTGAAGACTAACTACTGCGAAAGCATTTGCCAAGGATGTTTTCATTAATCA-AGAA 19620 Query 306 CGAAAGTTAGGGG 318 |||| |||||||| Sbjct 19619 CGAAGGTTAGGGG 19607 >seq39 Length=37533 Score = 405 bits (448), Expect = 9e-111 Identities = 279/313 (89%), Gaps = 2/313 (1%) Strand=Plus/Minus Query 7 GTCCGGCCGGGCCTTTCCTTCTGGGGATCCG-CATGCCCTTCACTGGGTGTGCCGGGGAG 65 ||| ||| ||| ||| ||| ||| || ||| ||||| |||||||||||||| |||||| Sbjct 3997 GTCTGGCTGGGTCTTACCTCTTGGTGAGCCGGCATGCTCTTCACTGGGTGTGTCGGGGAA 3938 Query 66 CCAGGACTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTCGAATACATT 125 ||||||||||||| |||| |||||||||||||||||||||||||| ||| |||||||||| Sbjct 3937 CCAGGACTTTTACCTTGAGAAAATTAGAGTGTTCAAAGCAGGCCTGTGCCCGAATACATT 3878 Query 126 AGCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACCGCCGTA 185 |||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||| Sbjct 3877 AGCATGGAATAATAAAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGAGTCGCCGTA 3818 Query 186 ATGATTAATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGGA 245 |||||||||||||||||| ||||| | |||||||| ||| |||||||||||||||||| Sbjct 3817 ATGATTAATAGGGATAGTTGGGGGCATTAGTATTCAGTTGCTAGAGGTGAAATTCTTGGA 3758 Query 246 TTTATTGAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTGAA 305 |||| ||||||||||||||||||||||| || |||||||||||||||||||||| ||| Sbjct 3757 TTTACTGAAGACTAACTACTGCGAAAGCATTTGCCAAGGATGTTTTCATTAATCA-AGAA 3699 Query 306 CGAAAGTTAGGGG 318 |||| |||||||| Sbjct 3698 CGAAGGTTAGGGG 3686 Score = 405 bits (448), Expect = 9e-111 Identities = 279/313 (89%), Gaps = 2/313 (1%) Strand=Plus/Minus Query 7 GTCCGGCCGGGCCTTTCCTTCTGGGGATCCG-CATGCCCTTCACTGGGTGTGCCGGGGAG 65 ||| ||| ||| ||| ||| ||| || ||| ||||| |||||||||||||| |||||| Sbjct 13614 GTCTGGCTGGGTCTTACCTCTTGGTGAGCCGGCATGCTCTTCACTGGGTGTGTCGGGGAA 13555 Query 66 CCAGGACTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTCGAATACATT 125 ||||||||||||| |||| |||||||||||||||||||||||||| ||| |||||||||| Sbjct 13554 CCAGGACTTTTACCTTGAGAAAATTAGAGTGTTCAAAGCAGGCCTGTGCCCGAATACATT 13495 Query 126 AGCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACCGCCGTA 185 |||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||| Sbjct 13494 AGCATGGAATAATAAAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGAGTCGCCGTA 13435 Query 186 ATGATTAATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGGA 245 |||||||||||||||||| ||||| | |||||||| ||| |||||||||||||||||| Sbjct 13434 ATGATTAATAGGGATAGTTGGGGGCATTAGTATTCAGTTGCTAGAGGTGAAATTCTTGGA 13375 Query 246 TTTATTGAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTGAA 305 |||| ||||||||||||||||||||||| || |||||||||||||||||||||| ||| Sbjct 13374 TTTACTGAAGACTAACTACTGCGAAAGCATTTGCCAAGGATGTTTTCATTAATCA-AGAA 13316 Query 306 CGAAAGTTAGGGG 318 |||| |||||||| Sbjct 13315 CGAAGGTTAGGGG 13303 Score = 405 bits (448), Expect = 9e-111 Identities = 279/313 (89%), Gaps = 2/313 (1%) Strand=Plus/Minus Query 7 GTCCGGCCGGGCCTTTCCTTCTGGGGATCCG-CATGCCCTTCACTGGGTGTGCCGGGGAG 65 ||| ||| ||| ||| ||| ||| || ||| ||||| |||||||||||||| |||||| Sbjct 31913 GTCTGGCTGGGTCTTACCTCTTGGTGAGCCGGCATGCTCTTCACTGGGTGTGTCGGGGAA 31854 Query 66 CCAGGACTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTCGAATACATT 125 ||||||||||||| |||| |||||||||||||||||||||||||| ||| |||||||||| Sbjct 31853 CCAGGACTTTTACCTTGAGAAAATTAGAGTGTTCAAAGCAGGCCTGTGCCCGAATACATT 31794 Query 126 AGCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACCGCCGTA 185 |||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||| Sbjct 31793 AGCATGGAATAATAAAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGAGTCGCCGTA 31734 Query 186 ATGATTAATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGGA 245 |||||||||||||||||| ||||| | |||||||| ||| |||||||||||||||||| Sbjct 31733 ATGATTAATAGGGATAGTTGGGGGCATTAGTATTCAGTTGCTAGAGGTGAAATTCTTGGA 31674 Query 246 TTTATTGAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTGAA 305 |||| ||||||||||||||||||||||| || |||||||||||||||||||||| ||| Sbjct 31673 TTTACTGAAGACTAACTACTGCGAAAGCATTTGCCAAGGATGTTTTCATTAATCA-AGAA 31615 Query 306 CGAAAGTTAGGGG 318 |||| |||||||| Sbjct 31614 CGAAGGTTAGGGG 31602 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 915197931648