Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fomitopsis_20palustris_20[genbank_20GCA_5F001937815.1_202017-01-06] 226 sequences; 43,856,698 total letters Query= AAMG01000911.1 Length=280 Score E Sequences producing significant alignments: (Bits) Value seq131 356 4e-96 seq105 356 4e-96 seq66 356 4e-96 seq39 356 4e-96 >seq131 Length=6970 Score = 356 bits (394), Expect = 4e-96 Identities = 233/257 (91%), Gaps = 0/257 (0%) Strand=Plus/Plus Query 2 ACTCGGTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGA 61 ||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 3184 ACTCGCTGGCTCTGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGA 3243 Query 62 CCTGTTATTGCCTCAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCCAGCC 121 |||||||||||||||||||||| | | | || | | |||||||||||||||||||| Sbjct 3244 CCTGTTATTGCCTCAAACTTCCGTCAGTTAGACACTGACAGTCCCTCTAAGAAGCCAGCA 3303 Query 122 ACCAACCATAGTCGATGGGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAA 181 ||| | | || || |||||||| |||||||||||||||||||||||||||||||||| Sbjct 3304 GCCAGCAAAAGCCGGCTGGGCTATTAAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAA 3363 Query 182 CCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAA 241 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||| Sbjct 3364 CCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAAAATCATGAA 3423 Query 242 AGAGCTATCAATCTGTC 258 ||||||||||||||||| Sbjct 3424 AGAGCTATCAATCTGTC 3440 >seq105 Length=13580 Score = 356 bits (394), Expect = 4e-96 Identities = 233/257 (91%), Gaps = 0/257 (0%) Strand=Plus/Plus Query 2 ACTCGGTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGA 61 ||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 12902 ACTCGCTGGCTCTGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGA 12961 Query 62 CCTGTTATTGCCTCAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCCAGCC 121 |||||||||||||||||||||| | | | || | | |||||||||||||||||||| Sbjct 12962 CCTGTTATTGCCTCAAACTTCCGTCAGTTAGACACTGACAGTCCCTCTAAGAAGCCAGCA 13021 Query 122 ACCAACCATAGTCGATGGGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAA 181 ||| | | || || |||||||| |||||||||||||||||||||||||||||||||| Sbjct 13022 GCCAGCAAAAGCCGGCTGGGCTATTAAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAA 13081 Query 182 CCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAA 241 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||| Sbjct 13082 CCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAAAATCATGAA 13141 Query 242 AGAGCTATCAATCTGTC 258 ||||||||||||||||| Sbjct 13142 AGAGCTATCAATCTGTC 13158 >seq66 Length=25538 Score = 356 bits (394), Expect = 4e-96 Identities = 233/257 (91%), Gaps = 0/257 (0%) Strand=Plus/Plus Query 2 ACTCGGTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGA 61 ||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 821 ACTCGCTGGCTCTGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGA 880 Query 62 CCTGTTATTGCCTCAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCCAGCC 121 |||||||||||||||||||||| | | | || | | |||||||||||||||||||| Sbjct 881 CCTGTTATTGCCTCAAACTTCCGTCAGTTAGACACTGACAGTCCCTCTAAGAAGCCAGCA 940 Query 122 ACCAACCATAGTCGATGGGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAA 181 ||| | | || || |||||||| |||||||||||||||||||||||||||||||||| Sbjct 941 GCCAGCAAAAGCCGGCTGGGCTATTAAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAA 1000 Query 182 CCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAA 241 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||| Sbjct 1001 CCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAAAATCATGAA 1060 Query 242 AGAGCTATCAATCTGTC 258 ||||||||||||||||| Sbjct 1061 AGAGCTATCAATCTGTC 1077 Score = 356 bits (394), Expect = 4e-96 Identities = 233/257 (91%), Gaps = 0/257 (0%) Strand=Plus/Plus Query 2 ACTCGGTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGA 61 ||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 10427 ACTCGCTGGCTCTGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGA 10486 Query 62 CCTGTTATTGCCTCAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCCAGCC 121 |||||||||||||||||||||| | | | || | | |||||||||||||||||||| Sbjct 10487 CCTGTTATTGCCTCAAACTTCCGTCAGTTAGACACTGACAGTCCCTCTAAGAAGCCAGCA 10546 Query 122 ACCAACCATAGTCGATGGGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAA 181 ||| | | || || |||||||| |||||||||||||||||||||||||||||||||| Sbjct 10547 GCCAGCAAAAGCCGGCTGGGCTATTAAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAA 10606 Query 182 CCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAA 241 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||| Sbjct 10607 CCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAAAATCATGAA 10666 Query 242 AGAGCTATCAATCTGTC 258 ||||||||||||||||| Sbjct 10667 AGAGCTATCAATCTGTC 10683 >seq39 Length=37533 Score = 356 bits (394), Expect = 4e-96 Identities = 233/257 (91%), Gaps = 0/257 (0%) Strand=Plus/Plus Query 2 ACTCGGTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGA 61 ||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 3184 ACTCGCTGGCTCTGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGA 3243 Query 62 CCTGTTATTGCCTCAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCCAGCC 121 |||||||||||||||||||||| | | | || | | |||||||||||||||||||| Sbjct 3244 CCTGTTATTGCCTCAAACTTCCGTCAGTTAGACACTGACAGTCCCTCTAAGAAGCCAGCA 3303 Query 122 ACCAACCATAGTCGATGGGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAA 181 ||| | | || || |||||||| |||||||||||||||||||||||||||||||||| Sbjct 3304 GCCAGCAAAAGCCGGCTGGGCTATTAAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAA 3363 Query 182 CCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAA 241 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||| Sbjct 3364 CCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAAAATCATGAA 3423 Query 242 AGAGCTATCAATCTGTC 258 ||||||||||||||||| Sbjct 3424 AGAGCTATCAATCTGTC 3440 Score = 356 bits (394), Expect = 4e-96 Identities = 233/257 (91%), Gaps = 0/257 (0%) Strand=Plus/Plus Query 2 ACTCGGTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGA 61 ||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 12801 ACTCGCTGGCTCTGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGA 12860 Query 62 CCTGTTATTGCCTCAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCCAGCC 121 |||||||||||||||||||||| | | | || | | |||||||||||||||||||| Sbjct 12861 CCTGTTATTGCCTCAAACTTCCGTCAGTTAGACACTGACAGTCCCTCTAAGAAGCCAGCA 12920 Query 122 ACCAACCATAGTCGATGGGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAA 181 ||| | | || || |||||||| |||||||||||||||||||||||||||||||||| Sbjct 12921 GCCAGCAAAAGCCGGCTGGGCTATTAAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAA 12980 Query 182 CCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAA 241 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||| Sbjct 12981 CCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAAAATCATGAA 13040 Query 242 AGAGCTATCAATCTGTC 258 ||||||||||||||||| Sbjct 13041 AGAGCTATCAATCTGTC 13057 Score = 356 bits (394), Expect = 4e-96 Identities = 233/257 (91%), Gaps = 0/257 (0%) Strand=Plus/Plus Query 2 ACTCGGTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGA 61 ||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 22418 ACTCGCTGGCTCTGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGA 22477 Query 62 CCTGTTATTGCCTCAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCCAGCC 121 |||||||||||||||||||||| | | | || | | |||||||||||||||||||| Sbjct 22478 CCTGTTATTGCCTCAAACTTCCGTCAGTTAGACACTGACAGTCCCTCTAAGAAGCCAGCA 22537 Query 122 ACCAACCATAGTCGATGGGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAA 181 ||| | | || || |||||||| |||||||||||||||||||||||||||||||||| Sbjct 22538 GCCAGCAAAAGCCGGCTGGGCTATTAAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAA 22597 Query 182 CCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAA 241 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||| Sbjct 22598 CCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAAAATCATGAA 22657 Query 242 AGAGCTATCAATCTGTC 258 ||||||||||||||||| Sbjct 22658 AGAGCTATCAATCTGTC 22674 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 796798255506