Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fomitopsis_20palustris_20[genbank_20GCA_5F001937815.1_202017-01-06] 226 sequences; 43,856,698 total letters Query= AAMG01001382.1 Length=124 Score E Sequences producing significant alignments: (Bits) Value seq131 118 6e-25 seq105 118 6e-25 seq66 118 6e-25 seq39 118 6e-25 >seq131 Length=6970 Score = 118 bits (130), Expect = 6e-25 Identities = 97/112 (87%), Gaps = 6/112 (5%) Strand=Plus/Plus Query 13 CCGTTCGCCGGGTCCACAAAGCCAATTCCGAAAGTTCTCACTAAGCCATTTCATTCGGTA 72 ||||| ||||| ||| | |||||||| || ||| |||||||||||||| || |||||| Sbjct 2966 CCGTT-GCCGGCTCCCCGAAGCCAATCCC--AAGACCTCACTAAGCCATT-CAATCGGTA 3021 Query 73 GTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGACGTAATACAACGCAAGCT 124 ||| ||||||||||| |||||||||||||||||||||||| |||||| |||| Sbjct 3022 GTA-GCGACGGGCGGTGTGTACAAAGGGCAGGGACGTAAT-CAACGCGAGCT 3071 >seq105 Length=13580 Score = 118 bits (130), Expect = 6e-25 Identities = 97/112 (87%), Gaps = 6/112 (5%) Strand=Plus/Plus Query 13 CCGTTCGCCGGGTCCACAAAGCCAATTCCGAAAGTTCTCACTAAGCCATTTCATTCGGTA 72 ||||| ||||| ||| | |||||||| || ||| |||||||||||||| || |||||| Sbjct 12684 CCGTT-GCCGGCTCCCCGAAGCCAATCCC--AAGACCTCACTAAGCCATT-CAATCGGTA 12739 Query 73 GTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGACGTAATACAACGCAAGCT 124 ||| ||||||||||| |||||||||||||||||||||||| |||||| |||| Sbjct 12740 GTA-GCGACGGGCGGTGTGTACAAAGGGCAGGGACGTAAT-CAACGCGAGCT 12789 >seq66 Length=25538 Score = 118 bits (130), Expect = 6e-25 Identities = 97/112 (87%), Gaps = 6/112 (5%) Strand=Plus/Plus Query 13 CCGTTCGCCGGGTCCACAAAGCCAATTCCGAAAGTTCTCACTAAGCCATTTCATTCGGTA 72 ||||| ||||| ||| | |||||||| || ||| |||||||||||||| || |||||| Sbjct 10209 CCGTT-GCCGGCTCCCCGAAGCCAATCCC--AAGACCTCACTAAGCCATT-CAATCGGTA 10264 Query 73 GTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGACGTAATACAACGCAAGCT 124 ||| ||||||||||| |||||||||||||||||||||||| |||||| |||| Sbjct 10265 GTA-GCGACGGGCGGTGTGTACAAAGGGCAGGGACGTAAT-CAACGCGAGCT 10314 Score = 109 bits (120), Expect = 3e-22 Identities = 96/112 (86%), Gaps = 7/112 (6%) Strand=Plus/Plus Query 13 CCGTTCGCCGGGTCCACAAAGCCAATTCCGAAAGTTCTCACTAAGCCATTTCATTCGGTA 72 ||||| ||||| ||| | |||||||| || ||| |||||||||||||| || |||||| Sbjct 604 CCGTT-GCCGGCTCCCCGAAGCCAATCCC--AAGACCTCACTAAGCCATT-CAATCGGTA 659 Query 73 GTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGACGTAATACAACGCAAGCT 124 ||| ||||||||||| |||||||||||||| ||||||||| |||||| |||| Sbjct 660 GTA-GCGACGGGCGGTGTGTACAAAGGGCA-GGACGTAAT-CAACGCGAGCT 708 >seq39 Length=37533 Score = 118 bits (130), Expect = 6e-25 Identities = 97/112 (87%), Gaps = 6/112 (5%) Strand=Plus/Plus Query 13 CCGTTCGCCGGGTCCACAAAGCCAATTCCGAAAGTTCTCACTAAGCCATTTCATTCGGTA 72 ||||| ||||| ||| | |||||||| || ||| |||||||||||||| || |||||| Sbjct 2966 CCGTT-GCCGGCTCCCCGAAGCCAATCCC--AAGACCTCACTAAGCCATT-CAATCGGTA 3021 Query 73 GTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGACGTAATACAACGCAAGCT 124 ||| ||||||||||| |||||||||||||||||||||||| |||||| |||| Sbjct 3022 GTA-GCGACGGGCGGTGTGTACAAAGGGCAGGGACGTAAT-CAACGCGAGCT 3071 Score = 118 bits (130), Expect = 6e-25 Identities = 97/112 (87%), Gaps = 6/112 (5%) Strand=Plus/Plus Query 13 CCGTTCGCCGGGTCCACAAAGCCAATTCCGAAAGTTCTCACTAAGCCATTTCATTCGGTA 72 ||||| ||||| ||| | |||||||| || ||| |||||||||||||| || |||||| Sbjct 12583 CCGTT-GCCGGCTCCCCGAAGCCAATCCC--AAGACCTCACTAAGCCATT-CAATCGGTA 12638 Query 73 GTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGACGTAATACAACGCAAGCT 124 ||| ||||||||||| |||||||||||||||||||||||| |||||| |||| Sbjct 12639 GTA-GCGACGGGCGGTGTGTACAAAGGGCAGGGACGTAAT-CAACGCGAGCT 12688 Score = 118 bits (130), Expect = 6e-25 Identities = 97/112 (87%), Gaps = 6/112 (5%) Strand=Plus/Plus Query 13 CCGTTCGCCGGGTCCACAAAGCCAATTCCGAAAGTTCTCACTAAGCCATTTCATTCGGTA 72 ||||| ||||| ||| | |||||||| || ||| |||||||||||||| || |||||| Sbjct 22200 CCGTT-GCCGGCTCCCCGAAGCCAATCCC--AAGACCTCACTAAGCCATT-CAATCGGTA 22255 Query 73 GTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGACGTAATACAACGCAAGCT 124 ||| ||||||||||| |||||||||||||||||||||||| |||||| |||| Sbjct 22256 GTA-GCGACGGGCGGTGTGTACAAAGGGCAGGGACGTAAT-CAACGCGAGCT 22305 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 300799362680