Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fomitopsis_20palustris_20[genbank_20GCA_5F001937815.1_202017-01-06]
226 sequences; 43,856,698 total letters
Query= AAMG01001634.1
Length=217
Score E
Sequences producing significant alignments: (Bits) Value
seq131 217 2e-54
seq105 217 2e-54
seq66 217 2e-54
seq39 217 2e-54
>seq131
Length=6970
Score = 217 bits (240), Expect = 2e-54
Identities = 168/197 (85%), Gaps = 2/197 (1%)
Strand=Plus/Plus
Query 1 CGTCTCTAGAAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGT 60
|| ||||||||||||||||||||| ||||||||||||| |||||||||||||||||||
Sbjct 3822 CGACTCTAGAAACCAACAAAATAGAACCGCACGTCCTATTTTATTATTCCATGCTAATGT 3881
Query 61 ATTCGGGCGTAAGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAGTCCTGGTTCCT 120
|||||||| | |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3882 ATTCGGGCACAGGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAGTCCTGGTTCCC 3941
Query 121 CCGCACA-CCAATGAAG-GCATACGGGCTCACCAAGAGGTAGGGCTGGGTAATGCAGTAC 178
| |||| ||| ||||| |||| | |||||||||||||||| | | | | ||||||
Sbjct 3942 CGACACACCCAGTGAAGAGCATGCCGGCTCACCAAGAGGTAAGACCCAGCCAGACAGTAC 4001
Query 179 TCGCCGTGAGGCGGACC 195
||||||||| ||||
Sbjct 4002 ATACCGTGAGGCAGACC 4018
>seq105
Length=13580
Score = 217 bits (240), Expect = 2e-54
Identities = 168/197 (85%), Gaps = 2/197 (1%)
Strand=Plus/Plus
Query 1 CGTCTCTAGAAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGT 60
|| ||||||||||||||||||||| ||||||||||||| |||||||||||||||||||
Sbjct 3925 CGACTCTAGAAACCAACAAAATAGAACCGCACGTCCTATTTTATTATTCCATGCTAATGT 3984
Query 61 ATTCGGGCGTAAGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAGTCCTGGTTCCT 120
|||||||| | |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3985 ATTCGGGCACAGGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAGTCCTGGTTCCC 4044
Query 121 CCGCACA-CCAATGAAG-GCATACGGGCTCACCAAGAGGTAGGGCTGGGTAATGCAGTAC 178
| |||| ||| ||||| |||| | |||||||||||||||| | | | | ||||||
Sbjct 4045 CGACACACCCAGTGAAGAGCATGCCGGCTCACCAAGAGGTAAGACCCAGCCAGACAGTAC 4104
Query 179 TCGCCGTGAGGCGGACC 195
||||||||| ||||
Sbjct 4105 ATACCGTGAGGCAGACC 4121
>seq66
Length=25538
Score = 217 bits (240), Expect = 2e-54
Identities = 168/197 (85%), Gaps = 2/197 (1%)
Strand=Plus/Plus
Query 1 CGTCTCTAGAAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGT 60
|| ||||||||||||||||||||| ||||||||||||| |||||||||||||||||||
Sbjct 1459 CGACTCTAGAAACCAACAAAATAGAACCGCACGTCCTATTTTATTATTCCATGCTAATGT 1518
Query 61 ATTCGGGCGTAAGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAGTCCTGGTTCCT 120
|||||||| | |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1519 ATTCGGGCACAGGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAGTCCTGGTTCCC 1578
Query 121 CCGCACA-CCAATGAAG-GCATACGGGCTCACCAAGAGGTAGGGCTGGGTAATGCAGTAC 178
| |||| ||| ||||| |||| | |||||||||||||||| | | | | ||||||
Sbjct 1579 CGACACACCCAGTGAAGAGCATGCCGGCTCACCAAGAGGTAAGACCCAGCCAGACAGTAC 1638
Query 179 TCGCCGTGAGGCGGACC 195
||||||||| ||||
Sbjct 1639 ATACCGTGAGGCAGACC 1655
Score = 217 bits (240), Expect = 2e-54
Identities = 168/197 (85%), Gaps = 2/197 (1%)
Strand=Plus/Plus
Query 1 CGTCTCTAGAAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGT 60
|| ||||||||||||||||||||| ||||||||||||| |||||||||||||||||||
Sbjct 19744 CGACTCTAGAAACCAACAAAATAGAACCGCACGTCCTATTTTATTATTCCATGCTAATGT 19803
Query 61 ATTCGGGCGTAAGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAGTCCTGGTTCCT 120
|||||||| | |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 19804 ATTCGGGCACAGGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAGTCCTGGTTCCC 19863
Query 121 CCGCACA-CCAATGAAG-GCATACGGGCTCACCAAGAGGTAGGGCTGGGTAATGCAGTAC 178
| |||| ||| ||||| |||| | |||||||||||||||| | | | | ||||||
Sbjct 19864 CGACACACCCAGTGAAGAGCATGCCGGCTCACCAAGAGGTAAGACCCAGCCAGACAGTAC 19923
Query 179 TCGCCGTGAGGCGGACC 195
||||||||| ||||
Sbjct 19924 ATACCGTGAGGCAGACC 19940
>seq39
Length=37533
Score = 217 bits (240), Expect = 2e-54
Identities = 168/197 (85%), Gaps = 2/197 (1%)
Strand=Plus/Plus
Query 1 CGTCTCTAGAAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGT 60
|| ||||||||||||||||||||| ||||||||||||| |||||||||||||||||||
Sbjct 3823 CGACTCTAGAAACCAACAAAATAGAACCGCACGTCCTATTTTATTATTCCATGCTAATGT 3882
Query 61 ATTCGGGCGTAAGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAGTCCTGGTTCCT 120
|||||||| | |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3883 ATTCGGGCACAGGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAGTCCTGGTTCCC 3942
Query 121 CCGCACA-CCAATGAAG-GCATACGGGCTCACCAAGAGGTAGGGCTGGGTAATGCAGTAC 178
| |||| ||| ||||| |||| | |||||||||||||||| | | | | ||||||
Sbjct 3943 CGACACACCCAGTGAAGAGCATGCCGGCTCACCAAGAGGTAAGACCCAGCCAGACAGTAC 4002
Query 179 TCGCCGTGAGGCGGACC 195
||||||||| ||||
Sbjct 4003 ATACCGTGAGGCAGACC 4019
Score = 217 bits (240), Expect = 2e-54
Identities = 168/197 (85%), Gaps = 2/197 (1%)
Strand=Plus/Plus
Query 1 CGTCTCTAGAAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGT 60
|| ||||||||||||||||||||| ||||||||||||| |||||||||||||||||||
Sbjct 13440 CGACTCTAGAAACCAACAAAATAGAACCGCACGTCCTATTTTATTATTCCATGCTAATGT 13499
Query 61 ATTCGGGCGTAAGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAGTCCTGGTTCCT 120
|||||||| | |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 13500 ATTCGGGCACAGGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAGTCCTGGTTCCC 13559
Query 121 CCGCACA-CCAATGAAG-GCATACGGGCTCACCAAGAGGTAGGGCTGGGTAATGCAGTAC 178
| |||| ||| ||||| |||| | |||||||||||||||| | | | | ||||||
Sbjct 13560 CGACACACCCAGTGAAGAGCATGCCGGCTCACCAAGAGGTAAGACCCAGCCAGACAGTAC 13619
Query 179 TCGCCGTGAGGCGGACC 195
||||||||| ||||
Sbjct 13620 ATACCGTGAGGCAGACC 13636
Score = 217 bits (240), Expect = 2e-54
Identities = 168/197 (85%), Gaps = 2/197 (1%)
Strand=Plus/Plus
Query 1 CGTCTCTAGAAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGT 60
|| ||||||||||||||||||||| ||||||||||||| |||||||||||||||||||
Sbjct 31739 CGACTCTAGAAACCAACAAAATAGAACCGCACGTCCTATTTTATTATTCCATGCTAATGT 31798
Query 61 ATTCGGGCGTAAGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAGTCCTGGTTCCT 120
|||||||| | |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 31799 ATTCGGGCACAGGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAGTCCTGGTTCCC 31858
Query 121 CCGCACA-CCAATGAAG-GCATACGGGCTCACCAAGAGGTAGGGCTGGGTAATGCAGTAC 178
| |||| ||| ||||| |||| | |||||||||||||||| | | | | ||||||
Sbjct 31859 CGACACACCCAGTGAAGAGCATGCCGGCTCACCAAGAGGTAAGACCCAGCCAGACAGTAC 31918
Query 179 TCGCCGTGAGGCGGACC 195
||||||||| ||||
Sbjct 31919 ATACCGTGAGGCAGACC 31935
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 595198696884
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |