Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fomitopsis_20palustris_20[genbank_20GCA_5F001937815.1_202017-01-06] 226 sequences; 43,856,698 total letters Query= AAMG01001634.1 Length=217 Score E Sequences producing significant alignments: (Bits) Value seq131 217 2e-54 seq105 217 2e-54 seq66 217 2e-54 seq39 217 2e-54 >seq131 Length=6970 Score = 217 bits (240), Expect = 2e-54 Identities = 168/197 (85%), Gaps = 2/197 (1%) Strand=Plus/Plus Query 1 CGTCTCTAGAAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGT 60 || ||||||||||||||||||||| ||||||||||||| ||||||||||||||||||| Sbjct 3822 CGACTCTAGAAACCAACAAAATAGAACCGCACGTCCTATTTTATTATTCCATGCTAATGT 3881 Query 61 ATTCGGGCGTAAGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAGTCCTGGTTCCT 120 |||||||| | ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 3882 ATTCGGGCACAGGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAGTCCTGGTTCCC 3941 Query 121 CCGCACA-CCAATGAAG-GCATACGGGCTCACCAAGAGGTAGGGCTGGGTAATGCAGTAC 178 | |||| ||| ||||| |||| | |||||||||||||||| | | | | |||||| Sbjct 3942 CGACACACCCAGTGAAGAGCATGCCGGCTCACCAAGAGGTAAGACCCAGCCAGACAGTAC 4001 Query 179 TCGCCGTGAGGCGGACC 195 ||||||||| |||| Sbjct 4002 ATACCGTGAGGCAGACC 4018 >seq105 Length=13580 Score = 217 bits (240), Expect = 2e-54 Identities = 168/197 (85%), Gaps = 2/197 (1%) Strand=Plus/Plus Query 1 CGTCTCTAGAAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGT 60 || ||||||||||||||||||||| ||||||||||||| ||||||||||||||||||| Sbjct 3925 CGACTCTAGAAACCAACAAAATAGAACCGCACGTCCTATTTTATTATTCCATGCTAATGT 3984 Query 61 ATTCGGGCGTAAGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAGTCCTGGTTCCT 120 |||||||| | ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 3985 ATTCGGGCACAGGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAGTCCTGGTTCCC 4044 Query 121 CCGCACA-CCAATGAAG-GCATACGGGCTCACCAAGAGGTAGGGCTGGGTAATGCAGTAC 178 | |||| ||| ||||| |||| | |||||||||||||||| | | | | |||||| Sbjct 4045 CGACACACCCAGTGAAGAGCATGCCGGCTCACCAAGAGGTAAGACCCAGCCAGACAGTAC 4104 Query 179 TCGCCGTGAGGCGGACC 195 ||||||||| |||| Sbjct 4105 ATACCGTGAGGCAGACC 4121 >seq66 Length=25538 Score = 217 bits (240), Expect = 2e-54 Identities = 168/197 (85%), Gaps = 2/197 (1%) Strand=Plus/Plus Query 1 CGTCTCTAGAAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGT 60 || ||||||||||||||||||||| ||||||||||||| ||||||||||||||||||| Sbjct 1459 CGACTCTAGAAACCAACAAAATAGAACCGCACGTCCTATTTTATTATTCCATGCTAATGT 1518 Query 61 ATTCGGGCGTAAGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAGTCCTGGTTCCT 120 |||||||| | ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1519 ATTCGGGCACAGGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAGTCCTGGTTCCC 1578 Query 121 CCGCACA-CCAATGAAG-GCATACGGGCTCACCAAGAGGTAGGGCTGGGTAATGCAGTAC 178 | |||| ||| ||||| |||| | |||||||||||||||| | | | | |||||| Sbjct 1579 CGACACACCCAGTGAAGAGCATGCCGGCTCACCAAGAGGTAAGACCCAGCCAGACAGTAC 1638 Query 179 TCGCCGTGAGGCGGACC 195 ||||||||| |||| Sbjct 1639 ATACCGTGAGGCAGACC 1655 Score = 217 bits (240), Expect = 2e-54 Identities = 168/197 (85%), Gaps = 2/197 (1%) Strand=Plus/Plus Query 1 CGTCTCTAGAAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGT 60 || ||||||||||||||||||||| ||||||||||||| ||||||||||||||||||| Sbjct 19744 CGACTCTAGAAACCAACAAAATAGAACCGCACGTCCTATTTTATTATTCCATGCTAATGT 19803 Query 61 ATTCGGGCGTAAGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAGTCCTGGTTCCT 120 |||||||| | ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 19804 ATTCGGGCACAGGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAGTCCTGGTTCCC 19863 Query 121 CCGCACA-CCAATGAAG-GCATACGGGCTCACCAAGAGGTAGGGCTGGGTAATGCAGTAC 178 | |||| ||| ||||| |||| | |||||||||||||||| | | | | |||||| Sbjct 19864 CGACACACCCAGTGAAGAGCATGCCGGCTCACCAAGAGGTAAGACCCAGCCAGACAGTAC 19923 Query 179 TCGCCGTGAGGCGGACC 195 ||||||||| |||| Sbjct 19924 ATACCGTGAGGCAGACC 19940 >seq39 Length=37533 Score = 217 bits (240), Expect = 2e-54 Identities = 168/197 (85%), Gaps = 2/197 (1%) Strand=Plus/Plus Query 1 CGTCTCTAGAAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGT 60 || ||||||||||||||||||||| ||||||||||||| ||||||||||||||||||| Sbjct 3823 CGACTCTAGAAACCAACAAAATAGAACCGCACGTCCTATTTTATTATTCCATGCTAATGT 3882 Query 61 ATTCGGGCGTAAGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAGTCCTGGTTCCT 120 |||||||| | ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 3883 ATTCGGGCACAGGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAGTCCTGGTTCCC 3942 Query 121 CCGCACA-CCAATGAAG-GCATACGGGCTCACCAAGAGGTAGGGCTGGGTAATGCAGTAC 178 | |||| ||| ||||| |||| | |||||||||||||||| | | | | |||||| Sbjct 3943 CGACACACCCAGTGAAGAGCATGCCGGCTCACCAAGAGGTAAGACCCAGCCAGACAGTAC 4002 Query 179 TCGCCGTGAGGCGGACC 195 ||||||||| |||| Sbjct 4003 ATACCGTGAGGCAGACC 4019 Score = 217 bits (240), Expect = 2e-54 Identities = 168/197 (85%), Gaps = 2/197 (1%) Strand=Plus/Plus Query 1 CGTCTCTAGAAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGT 60 || ||||||||||||||||||||| ||||||||||||| ||||||||||||||||||| Sbjct 13440 CGACTCTAGAAACCAACAAAATAGAACCGCACGTCCTATTTTATTATTCCATGCTAATGT 13499 Query 61 ATTCGGGCGTAAGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAGTCCTGGTTCCT 120 |||||||| | ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 13500 ATTCGGGCACAGGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAGTCCTGGTTCCC 13559 Query 121 CCGCACA-CCAATGAAG-GCATACGGGCTCACCAAGAGGTAGGGCTGGGTAATGCAGTAC 178 | |||| ||| ||||| |||| | |||||||||||||||| | | | | |||||| Sbjct 13560 CGACACACCCAGTGAAGAGCATGCCGGCTCACCAAGAGGTAAGACCCAGCCAGACAGTAC 13619 Query 179 TCGCCGTGAGGCGGACC 195 ||||||||| |||| Sbjct 13620 ATACCGTGAGGCAGACC 13636 Score = 217 bits (240), Expect = 2e-54 Identities = 168/197 (85%), Gaps = 2/197 (1%) Strand=Plus/Plus Query 1 CGTCTCTAGAAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGT 60 || ||||||||||||||||||||| ||||||||||||| ||||||||||||||||||| Sbjct 31739 CGACTCTAGAAACCAACAAAATAGAACCGCACGTCCTATTTTATTATTCCATGCTAATGT 31798 Query 61 ATTCGGGCGTAAGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAGTCCTGGTTCCT 120 |||||||| | ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 31799 ATTCGGGCACAGGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAGTCCTGGTTCCC 31858 Query 121 CCGCACA-CCAATGAAG-GCATACGGGCTCACCAAGAGGTAGGGCTGGGTAATGCAGTAC 178 | |||| ||| ||||| |||| | |||||||||||||||| | | | | |||||| Sbjct 31859 CGACACACCCAGTGAAGAGCATGCCGGCTCACCAAGAGGTAAGACCCAGCCAGACAGTAC 31918 Query 179 TCGCCGTGAGGCGGACC 195 ||||||||| |||| Sbjct 31919 ATACCGTGAGGCAGACC 31935 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 595198696884