Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fomitopsis_20palustris_20[genbank_20GCA_5F001937815.1_202017-01-06] 226 sequences; 43,856,698 total letters Query= AAMG01001884.1 Length=191 Score E Sequences producing significant alignments: (Bits) Value seq131 239 5e-61 seq105 239 5e-61 seq66 239 5e-61 seq39 239 5e-61 >seq131 Length=6970 Score = 239 bits (264), Expect = 5e-61 Identities = 167/189 (88%), Gaps = 1/189 (1%) Strand=Plus/Minus Query 1 GGAACCAGGACTTTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCCTTTGCTCGAATA 60 ||||||||||||||||| |||| |||||||||| ||||||||||||||| ||| |||||| Sbjct 3940 GGAACCAGGACTTTTACCTTGAGAAAATTAGAGTGTTCAAAGCAGGCCTGTGCCCGAATA 3881 Query 61 CATTACCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGC 120 ||||| |||||||||||| ||||||||||||||||||||||||| ||||||||| || Sbjct 3880 CATTAGCATGGAATAATAAAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGAGTCG- 3822 Query 121 CCGTAATGATAAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTC 180 |||||||||| |||| ||||||| ||||| | |||||||| ||| | ||||||||||| Sbjct 3821 CCGTAATGATTAATAGGGATAGTTGGGGGCATTAGTATTCAGTTGCTAGAGGTGAAATTC 3762 Query 181 TTGGATTTA 189 ||||||||| Sbjct 3761 TTGGATTTA 3753 >seq105 Length=13580 Score = 239 bits (264), Expect = 5e-61 Identities = 167/189 (88%), Gaps = 1/189 (1%) Strand=Plus/Minus Query 1 GGAACCAGGACTTTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCCTTTGCTCGAATA 60 ||||||||||||||||| |||| |||||||||| ||||||||||||||| ||| |||||| Sbjct 4043 GGAACCAGGACTTTTACCTTGAGAAAATTAGAGTGTTCAAAGCAGGCCTGTGCCCGAATA 3984 Query 61 CATTACCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGC 120 ||||| |||||||||||| ||||||||||||||||||||||||| ||||||||| || Sbjct 3983 CATTAGCATGGAATAATAAAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGAGTCG- 3925 Query 121 CCGTAATGATAAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTC 180 |||||||||| |||| ||||||| ||||| | |||||||| ||| | ||||||||||| Sbjct 3924 CCGTAATGATTAATAGGGATAGTTGGGGGCATTAGTATTCAGTTGCTAGAGGTGAAATTC 3865 Query 181 TTGGATTTA 189 ||||||||| Sbjct 3864 TTGGATTTA 3856 Score = 127 bits (140), Expect = 2e-27 Identities = 95/110 (86%), Gaps = 1/110 (1%) Strand=Plus/Minus Query 80 AATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGCCCGTAATGATAAATACGGA 139 ||||||||||||||||||||||||| ||||||||| |||| |||||||| |||| ||| Sbjct 13580 AATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGAGTCGCC-GTAATGATTAATAGGGA 13522 Query 140 TAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTCTTGGATTTA 189 |||| ||||| | |||||||| ||| | |||||||||||||||||||| Sbjct 13521 TAGTTGGGGGCATTAGTATTCAGTTGCTAGAGGTGAAATTCTTGGATTTA 13472 >seq66 Length=25538 Score = 239 bits (264), Expect = 5e-61 Identities = 167/189 (88%), Gaps = 1/189 (1%) Strand=Plus/Minus Query 1 GGAACCAGGACTTTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCCTTTGCTCGAATA 60 ||||||||||||||||| |||| |||||||||| ||||||||||||||| ||| |||||| Sbjct 1577 GGAACCAGGACTTTTACCTTGAGAAAATTAGAGTGTTCAAAGCAGGCCTGTGCCCGAATA 1518 Query 61 CATTACCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGC 120 ||||| |||||||||||| ||||||||||||||||||||||||| ||||||||| || Sbjct 1517 CATTAGCATGGAATAATAAAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGAGTCG- 1459 Query 121 CCGTAATGATAAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTC 180 |||||||||| |||| ||||||| ||||| | |||||||| ||| | ||||||||||| Sbjct 1458 CCGTAATGATTAATAGGGATAGTTGGGGGCATTAGTATTCAGTTGCTAGAGGTGAAATTC 1399 Query 181 TTGGATTTA 189 ||||||||| Sbjct 1398 TTGGATTTA 1390 Score = 239 bits (264), Expect = 5e-61 Identities = 167/189 (88%), Gaps = 1/189 (1%) Strand=Plus/Minus Query 1 GGAACCAGGACTTTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCCTTTGCTCGAATA 60 ||||||||||||||||| |||| |||||||||| ||||||||||||||| ||| |||||| Sbjct 19862 GGAACCAGGACTTTTACCTTGAGAAAATTAGAGTGTTCAAAGCAGGCCTGTGCCCGAATA 19803 Query 61 CATTACCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGC 120 ||||| |||||||||||| ||||||||||||||||||||||||| ||||||||| || Sbjct 19802 CATTAGCATGGAATAATAAAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGAGTCG- 19744 Query 121 CCGTAATGATAAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTC 180 |||||||||| |||| ||||||| ||||| | |||||||| ||| | ||||||||||| Sbjct 19743 CCGTAATGATTAATAGGGATAGTTGGGGGCATTAGTATTCAGTTGCTAGAGGTGAAATTC 19684 Query 181 TTGGATTTA 189 ||||||||| Sbjct 19683 TTGGATTTA 19675 >seq39 Length=37533 Score = 239 bits (264), Expect = 5e-61 Identities = 167/189 (88%), Gaps = 1/189 (1%) Strand=Plus/Minus Query 1 GGAACCAGGACTTTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCCTTTGCTCGAATA 60 ||||||||||||||||| |||| |||||||||| ||||||||||||||| ||| |||||| Sbjct 3941 GGAACCAGGACTTTTACCTTGAGAAAATTAGAGTGTTCAAAGCAGGCCTGTGCCCGAATA 3882 Query 61 CATTACCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGC 120 ||||| |||||||||||| ||||||||||||||||||||||||| ||||||||| || Sbjct 3881 CATTAGCATGGAATAATAAAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGAGTCG- 3823 Query 121 CCGTAATGATAAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTC 180 |||||||||| |||| ||||||| ||||| | |||||||| ||| | ||||||||||| Sbjct 3822 CCGTAATGATTAATAGGGATAGTTGGGGGCATTAGTATTCAGTTGCTAGAGGTGAAATTC 3763 Query 181 TTGGATTTA 189 ||||||||| Sbjct 3762 TTGGATTTA 3754 Score = 239 bits (264), Expect = 5e-61 Identities = 167/189 (88%), Gaps = 1/189 (1%) Strand=Plus/Minus Query 1 GGAACCAGGACTTTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCCTTTGCTCGAATA 60 ||||||||||||||||| |||| |||||||||| ||||||||||||||| ||| |||||| Sbjct 13558 GGAACCAGGACTTTTACCTTGAGAAAATTAGAGTGTTCAAAGCAGGCCTGTGCCCGAATA 13499 Query 61 CATTACCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGC 120 ||||| |||||||||||| ||||||||||||||||||||||||| ||||||||| || Sbjct 13498 CATTAGCATGGAATAATAAAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGAGTCG- 13440 Query 121 CCGTAATGATAAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTC 180 |||||||||| |||| ||||||| ||||| | |||||||| ||| | ||||||||||| Sbjct 13439 CCGTAATGATTAATAGGGATAGTTGGGGGCATTAGTATTCAGTTGCTAGAGGTGAAATTC 13380 Query 181 TTGGATTTA 189 ||||||||| Sbjct 13379 TTGGATTTA 13371 Score = 239 bits (264), Expect = 5e-61 Identities = 167/189 (88%), Gaps = 1/189 (1%) Strand=Plus/Minus Query 1 GGAACCAGGACTTTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCCTTTGCTCGAATA 60 ||||||||||||||||| |||| |||||||||| ||||||||||||||| ||| |||||| Sbjct 31857 GGAACCAGGACTTTTACCTTGAGAAAATTAGAGTGTTCAAAGCAGGCCTGTGCCCGAATA 31798 Query 61 CATTACCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGC 120 ||||| |||||||||||| ||||||||||||||||||||||||| ||||||||| || Sbjct 31797 CATTAGCATGGAATAATAAAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGAGTCG- 31739 Query 121 CCGTAATGATAAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTC 180 |||||||||| |||| ||||||| ||||| | |||||||| ||| | ||||||||||| Sbjct 31738 CCGTAATGATTAATAGGGATAGTTGGGGGCATTAGTATTCAGTTGCTAGAGGTGAAATTC 31679 Query 181 TTGGATTTA 189 ||||||||| Sbjct 31678 TTGGATTTA 31670 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 511998879040