Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fomitopsis_20palustris_20[genbank_20GCA_5F001937815.1_202017-01-06]
226 sequences; 43,856,698 total letters
Query= AAMG01001962.1
Length=275
Score E
Sequences producing significant alignments: (Bits) Value
seq223 78.8 1e-12
seq201 78.8 1e-12
>seq223
Length=62264
Score = 78.8 bits (86), Expect = 1e-12
Identities = 87/116 (75%), Gaps = 0/116 (0%)
Strand=Plus/Plus
Query 160 GATAGGGACCGAACTGTCTCGCGACGTTCTGAACCCAGCTCGCGTGCCTCTTTAATGGGC 219
|||||||||| |||| ||| || ||| | |||||| ||||||| | |||||| |||
Sbjct 37012 GATAGGGACCATACTGACTCACGTCGTATTAAACCCAACTCGCGTAACCTTTTAATCGGC 37071
Query 220 GAACAGCCCAACCCTTGGGACCTACTTCAGCCCCAGGATGAGACGAGCCGACATCG 275
|||||||| ||||||| | || |||| || ||||| | ||| ||||||||
Sbjct 37072 GAACAGCCGAACCCTTCCAATCTTTTTCACCCGGAGGATAGGTTGAGTCGACATCG 37127
>seq201
Length=98688
Score = 78.8 bits (86), Expect = 1e-12
Identities = 87/116 (75%), Gaps = 0/116 (0%)
Strand=Plus/Plus
Query 160 GATAGGGACCGAACTGTCTCGCGACGTTCTGAACCCAGCTCGCGTGCCTCTTTAATGGGC 219
|||||||||| |||| ||| || ||| | |||||| ||||||| | |||||| |||
Sbjct 36991 GATAGGGACCATACTGACTCACGTCGTATTAAACCCAACTCGCGTAACCTTTTAATCGGC 37050
Query 220 GAACAGCCCAACCCTTGGGACCTACTTCAGCCCCAGGATGAGACGAGCCGACATCG 275
|||||||| ||||||| | || |||| || ||||| | ||| ||||||||
Sbjct 37051 GAACAGCCGAACCCTTCCAATCTTTTTCACCCGGAGGATAGGTTGAGTCGACATCG 37106
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 780798290536
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |