Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fomitopsis_20palustris_20[genbank_20GCA_5F001937815.1_202017-01-06] 226 sequences; 43,856,698 total letters Query= AAMG01001962.1 Length=275 Score E Sequences producing significant alignments: (Bits) Value seq223 78.8 1e-12 seq201 78.8 1e-12 >seq223 Length=62264 Score = 78.8 bits (86), Expect = 1e-12 Identities = 87/116 (75%), Gaps = 0/116 (0%) Strand=Plus/Plus Query 160 GATAGGGACCGAACTGTCTCGCGACGTTCTGAACCCAGCTCGCGTGCCTCTTTAATGGGC 219 |||||||||| |||| ||| || ||| | |||||| ||||||| | |||||| ||| Sbjct 37012 GATAGGGACCATACTGACTCACGTCGTATTAAACCCAACTCGCGTAACCTTTTAATCGGC 37071 Query 220 GAACAGCCCAACCCTTGGGACCTACTTCAGCCCCAGGATGAGACGAGCCGACATCG 275 |||||||| ||||||| | || |||| || ||||| | ||| |||||||| Sbjct 37072 GAACAGCCGAACCCTTCCAATCTTTTTCACCCGGAGGATAGGTTGAGTCGACATCG 37127 >seq201 Length=98688 Score = 78.8 bits (86), Expect = 1e-12 Identities = 87/116 (75%), Gaps = 0/116 (0%) Strand=Plus/Plus Query 160 GATAGGGACCGAACTGTCTCGCGACGTTCTGAACCCAGCTCGCGTGCCTCTTTAATGGGC 219 |||||||||| |||| ||| || ||| | |||||| ||||||| | |||||| ||| Sbjct 36991 GATAGGGACCATACTGACTCACGTCGTATTAAACCCAACTCGCGTAACCTTTTAATCGGC 37050 Query 220 GAACAGCCCAACCCTTGGGACCTACTTCAGCCCCAGGATGAGACGAGCCGACATCG 275 |||||||| ||||||| | || |||| || ||||| | ||| |||||||| Sbjct 37051 GAACAGCCGAACCCTTCCAATCTTTTTCACCCGGAGGATAGGTTGAGTCGACATCG 37106 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 780798290536