Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fomitopsis_20palustris_20[genbank_20GCA_5F001937815.1_202017-01-06]
226 sequences; 43,856,698 total letters
Query= AAMG01002236.1
Length=287
Score E
Sequences producing significant alignments: (Bits) Value
seq105 138 2e-30
seq66 138 2e-30
seq39 138 2e-30
>seq105
Length=13580
Score = 138 bits (152), Expect = 2e-30
Identities = 106/123 (86%), Gaps = 2/123 (2%)
Strand=Plus/Minus
Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60
||||||||||||||| | |||||| || ||||| |||||| ||||| || | |||| |
Sbjct 8980 GTACGAGAGGAACCGTTCA-TTCAGA-TATTTGGTATTTGCGCCTGTCCGATCGGGCAAT 8923
Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 120
| |||||||||| |||||||||||||||||||||||||||||||| |||||||| ||| |
Sbjct 8922 GGCGCGAAGCTATCATCTGCTGGATTATGGCTGAACGCCTCTAAGCCAGAATCCGTGCTA 8863
Query 121 GAA 123
|||
Sbjct 8862 GAA 8860
>seq66
Length=25538
Score = 138 bits (152), Expect = 2e-30
Identities = 106/123 (86%), Gaps = 2/123 (2%)
Strand=Plus/Minus
Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60
||||||||||||||| | |||||| || ||||| |||||| ||||| || | |||| |
Sbjct 6505 GTACGAGAGGAACCGTTCA-TTCAGA-TATTTGGTATTTGCGCCTGTCCGATCGGGCAAT 6448
Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 120
| |||||||||| |||||||||||||||||||||||||||||||| |||||||| ||| |
Sbjct 6447 GGCGCGAAGCTATCATCTGCTGGATTATGGCTGAACGCCTCTAAGCCAGAATCCGTGCTA 6388
Query 121 GAA 123
|||
Sbjct 6387 GAA 6385
Score = 138 bits (152), Expect = 2e-30
Identities = 106/123 (86%), Gaps = 2/123 (2%)
Strand=Plus/Minus
Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60
||||||||||||||| | |||||| || ||||| |||||| ||||| || | |||| |
Sbjct 24800 GTACGAGAGGAACCGTTCA-TTCAGA-TATTTGGTATTTGCGCCTGTCCGATCGGGCAAT 24743
Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 120
| |||||||||| |||||||||||||||||||||||||||||||| |||||||| ||| |
Sbjct 24742 GGCGCGAAGCTATCATCTGCTGGATTATGGCTGAACGCCTCTAAGCCAGAATCCGTGCTA 24683
Query 121 GAA 123
|||
Sbjct 24682 GAA 24680
>seq39
Length=37533
Score = 138 bits (152), Expect = 2e-30
Identities = 106/123 (86%), Gaps = 2/123 (2%)
Strand=Plus/Minus
Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60
||||||||||||||| | |||||| || ||||| |||||| ||||| || | |||| |
Sbjct 8879 GTACGAGAGGAACCGTTCA-TTCAGA-TATTTGGTATTTGCGCCTGTCCGATCGGGCAAT 8822
Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 120
| |||||||||| |||||||||||||||||||||||||||||||| |||||||| ||| |
Sbjct 8821 GGCGCGAAGCTATCATCTGCTGGATTATGGCTGAACGCCTCTAAGCCAGAATCCGTGCTA 8762
Query 121 GAA 123
|||
Sbjct 8761 GAA 8759
Score = 138 bits (152), Expect = 2e-30
Identities = 106/123 (86%), Gaps = 2/123 (2%)
Strand=Plus/Minus
Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60
||||||||||||||| | |||||| || ||||| |||||| ||||| || | |||| |
Sbjct 18496 GTACGAGAGGAACCGTTCA-TTCAGA-TATTTGGTATTTGCGCCTGTCCGATCGGGCAAT 18439
Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 120
| |||||||||| |||||||||||||||||||||||||||||||| |||||||| ||| |
Sbjct 18438 GGCGCGAAGCTATCATCTGCTGGATTATGGCTGAACGCCTCTAAGCCAGAATCCGTGCTA 18379
Query 121 GAA 123
|||
Sbjct 18378 GAA 18376
Score = 138 bits (152), Expect = 2e-30
Identities = 106/123 (86%), Gaps = 2/123 (2%)
Strand=Plus/Minus
Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60
||||||||||||||| | |||||| || ||||| |||||| ||||| || | |||| |
Sbjct 36795 GTACGAGAGGAACCGTTCA-TTCAGA-TATTTGGTATTTGCGCCTGTCCGATCGGGCAAT 36738
Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 120
| |||||||||| |||||||||||||||||||||||||||||||| |||||||| ||| |
Sbjct 36737 GGCGCGAAGCTATCATCTGCTGGATTATGGCTGAACGCCTCTAAGCCAGAATCCGTGCTA 36678
Query 121 GAA 123
|||
Sbjct 36677 GAA 36675
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 819198206464
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |