Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fomitopsis_20pinicola_20[genbank_20GCA_5F001931775.1_202017-01-04] 2,178 sequences; 45,982,938 total letters Query= AAMG01000185.1 Length=266 Score E Sequences producing significant alignments: (Bits) Value seq1335 284 2e-74 seq813 149 9e-34 >seq1335 Length=43126 Score = 284 bits (314), Expect = 2e-74 Identities = 204/231 (88%), Gaps = 3/231 (1%) Strand=Plus/Plus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 |||||||||||||||||||| |||||||||||| |||||||| ||||||||||| ||| | Sbjct 37531 GTACAAAGGGCAGGGACGTAATCAACGCGAGCT-GATGACTCACGCTTACTAGGTATT-C 37588 Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCA-AAGATT 119 ||||||||||| ||| |||||||||| |||||||||| ||||| | ||||| |||||| Sbjct 37589 CTCGTTGAAGAGCAATAATTGCAATGCTCTATCCCCAGCACGACAGAGTTTCACAAGATT 37648 Query 120 ACCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCG 179 |||| ||||| ||||||||| | | ||||| || | ||||||||||||||||||| Sbjct 37649 ACCCAGACCTTCCGGCCAAGGAAAAAAACTCGCTGGCTCTGTCAGTGTAGCGCGCGTGCG 37708 Query 180 GCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCGT 230 ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 37709 GCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCGT 37759 >seq813 Length=52022 Score = 149 bits (164), Expect = 9e-34 Identities = 117/139 (84%), Gaps = 1/139 (1%) Strand=Plus/Plus Query 62 TCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCA-AAGATTA 120 |||||||||| ||| |||||||||| |||||||||| ||||| | ||||| ||||||| Sbjct 190 TCGTTGAAGAGCAATAATTGCAATGCTCTATCCCCAGCACGACAGAGTTTCACAAGATTA 249 Query 121 CCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCGG 180 ||| ||||| ||||||||| | | ||||| || | |||||||||||||||||||| Sbjct 250 CCCAGACCTTCCGGCCAAGGAAAAAAACTCGCTGGCTCTGTCAGTGTAGCGCGCGTGCGG 309 Query 181 CCCAGAACATCTAAGGGCA 199 ||||||||||||||||||| Sbjct 310 CCCAGAACATCTAAGGGCA 328 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 751984133270