Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fomitopsis_20pinicola_20[genbank_20GCA_5F001931775.1_202017-01-04] 2,178 sequences; 45,982,938 total letters Query= AAMG01000304.1 Length=683 Score E Sequences producing significant alignments: (Bits) Value seq1335 533 6e-149 seq55 533 6e-149 >seq1335 Length=43126 Score = 533 bits (590), Expect = 6e-149 Identities = 536/684 (78%), Gaps = 52/684 (8%) Strand=Plus/Minus Query 40 GAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTTCTAAAGCTAAAT 99 ||||||||||||||||||||||||||| ||||||| |||||||| | ||||||||||||| Sbjct 35680 GAGTCGAGTTGTTTGGGAATGCAGCTCAAAATGGGTGGTAAATTCCATCTAAAGCTAAAT 35621 Query 100 ATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACTTTGGAA 159 |||||| |||||||||||||| ||||||| |||| ||||||||||||||||||||||| Sbjct 35620 ATTGGCGAGAGACCGATAGCGAACAAGTACCGTGAGGGAAAGATGAAAAGCACTTTGGAA 35561 Query 160 AGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGCGCTTGCAACCAGAC---TTGC 216 ||||||||||| || ||||||||||| |||||||||| |||||| | ||| | ||| Sbjct 35560 AGAGAGTTAAACAGTACGTGAAATTGCTGAAAGGGAAACGCTTGAAGTCAGTCGCGTTGG 35501 Query 217 CCGCAGTTGCTCAACCGGCCCCTCGGCCGGTGCACTCTTCTGCG-GTCAGGCCAGCATCA 275 || || |||| || | | | |||||| | ||||| | | |||||||||| Sbjct 35500 CC--AGGA-CTCAGCCTTGCTTTTGCTTGGTGCATT-TTCTGGTTGACGGGCCAGCATCG 35445 Query 276 GCTCGGGCGGTCGGATAAAGGCCCCGGGAATGTGGCCCCCTTCGGGGGGTGTTATAGCCC 335 | | | | ||| ||||| ||||||||||| || |||||| | ||||||||||| Sbjct 35444 ATTTTGACCGCTGGAAAAAGGTTAGGGGAATGTGGCACC-TTCGGGTG-TGTTATAGCCC 35387 Query 336 G--------------GGGTGGAAT--------GCGGCCCGCCTGGA---CTGAGGTCCGC 370 || ||| || || || ||||| | | | ||| ||| Sbjct 35386 TTAGTCGCATACAGTGGTTGGGATCGAGGACCGCAGCACGCCTTTATGGCCGGGGTTCGC 35327 Query 371 GCTC---CG-GCT-AGGATGCTGGCGTAATGGTTGTAAGCGGCCCGTCTTGGAACACGGA 425 | | || ||| |||||||||||||||||| | ||| || ||||||||| |||||||| Sbjct 35326 CCACGTTCGTGCTTAGGATGCTGGCGTAATGGCTTTAAACGACCCGTCTTGAAACACGGA 35267 Query 426 CCAAGGAGTCTAACATCTATGCGAGTGTTTGGGTGTCAAACCCGTGCGCGTAATGAAAGT 485 |||||||||||||||| |||||||||||||||| ||||||| ||||||||||||||| Sbjct 35266 CCAAGGAGTCTAACATGCCTGCGAGTGTTTGGGTGGAAAACCCGAGCGCGTAATGAAAGT 35207 Query 486 GAACGGAGGTGGGAACCC----GTGAGGGTGCACCATCGACCGATCCTGATGTCTTCGG- 540 ||| || || || ||| ||| ||| ||| | || ||| ||||| |||||| Sbjct 35206 GAA---AGTTGAGATCCCTGTCGTG-GGGAGCATCGACGCCCGGACCTGAA--CTTCGGT 35153 Query 541 -ATGGATTTGAGTAAGAGCATAGCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAAT 599 |||||| || | ||||||| |||||||||||||||||||||||||||||||||||| Sbjct 35152 GATGGATCTGCGGTAGAGCATGTATGTTGGGACCCGAAAGATGGTGAACTATGCCTGAAT 35093 Query 600 AGGGTGAAGCCAGAGGAAACTCTGGTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGAT 659 ||||||||||||||||||||||||||||||||||| |||| ||||| ||||||||||||| Sbjct 35092 AGGGTGAAGCCAGAGGAAACTCTGGTGGAGGCTCGTAGCGATTCTGACGTGCAAATCGAT 35033 Query 660 CGTCAAATTTGGGTATAGGGGCGA 683 |||||||||||||||||||||||| Sbjct 35032 CGTCAAATTTGGGTATAGGGGCGA 35009 >seq55 Length=3912 Score = 533 bits (590), Expect = 6e-149 Identities = 536/684 (78%), Gaps = 52/684 (8%) Strand=Plus/Minus Query 40 GAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTTCTAAAGCTAAAT 99 ||||||||||||||||||||||||||| ||||||| |||||||| | ||||||||||||| Sbjct 3160 GAGTCGAGTTGTTTGGGAATGCAGCTCAAAATGGGTGGTAAATTCCATCTAAAGCTAAAT 3101 Query 100 ATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACTTTGGAA 159 |||||| |||||||||||||| ||||||| |||| ||||||||||||||||||||||| Sbjct 3100 ATTGGCGAGAGACCGATAGCGAACAAGTACCGTGAGGGAAAGATGAAAAGCACTTTGGAA 3041 Query 160 AGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGCGCTTGCAACCAGAC---TTGC 216 ||||||||||| || ||||||||||| |||||||||| |||||| | ||| | ||| Sbjct 3040 AGAGAGTTAAACAGTACGTGAAATTGCTGAAAGGGAAACGCTTGAAGTCAGTCGCGTTGG 2981 Query 217 CCGCAGTTGCTCAACCGGCCCCTCGGCCGGTGCACTCTTCTGCG-GTCAGGCCAGCATCA 275 || || |||| || | | | |||||| | ||||| | | |||||||||| Sbjct 2980 CC--AGGA-CTCAGCCTTGCTTTTGCTTGGTGCATT-TTCTGGTTGACGGGCCAGCATCG 2925 Query 276 GCTCGGGCGGTCGGATAAAGGCCCCGGGAATGTGGCCCCCTTCGGGGGGTGTTATAGCCC 335 | | | | ||| ||||| ||||||||||| || |||||| | ||||||||||| Sbjct 2924 ATTTTGACCGCTGGAAAAAGGTTAGGGGAATGTGGCACC-TTCGGGTG-TGTTATAGCCC 2867 Query 336 G--------------GGGTGGAAT--------GCGGCCCGCCTGGA---CTGAGGTCCGC 370 || ||| || || || ||||| | | | ||| ||| Sbjct 2866 TTAGTCGCATACAGTGGTTGGGATCGAGGACCGCAGCACGCCTTTATGGCCGGGGTTCGC 2807 Query 371 GCTC---CG-GCT-AGGATGCTGGCGTAATGGTTGTAAGCGGCCCGTCTTGGAACACGGA 425 | | || ||| |||||||||||||||||| | ||| || ||||||||| |||||||| Sbjct 2806 CCACGTTCGTGCTTAGGATGCTGGCGTAATGGCTTTAAACGACCCGTCTTGAAACACGGA 2747 Query 426 CCAAGGAGTCTAACATCTATGCGAGTGTTTGGGTGTCAAACCCGTGCGCGTAATGAAAGT 485 |||||||||||||||| |||||||||||||||| ||||||| ||||||||||||||| Sbjct 2746 CCAAGGAGTCTAACATGCCTGCGAGTGTTTGGGTGGAAAACCCGAGCGCGTAATGAAAGT 2687 Query 486 GAACGGAGGTGGGAACCC----GTGAGGGTGCACCATCGACCGATCCTGATGTCTTCGG- 540 ||| || || || ||| ||| ||| ||| | || ||| ||||| |||||| Sbjct 2686 GAA---AGTTGAGATCCCTGTCGTG-GGGAGCATCGACGCCCGGACCTGAA--CTTCGGT 2633 Query 541 -ATGGATTTGAGTAAGAGCATAGCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAAT 599 |||||| || | ||||||| |||||||||||||||||||||||||||||||||||| Sbjct 2632 GATGGATCTGCGGTAGAGCATGTATGTTGGGACCCGAAAGATGGTGAACTATGCCTGAAT 2573 Query 600 AGGGTGAAGCCAGAGGAAACTCTGGTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGAT 659 ||||||||||||||||||||||||||||||||||| |||| ||||| ||||||||||||| Sbjct 2572 AGGGTGAAGCCAGAGGAAACTCTGGTGGAGGCTCGTAGCGATTCTGACGTGCAAATCGAT 2513 Query 660 CGTCAAATTTGGGTATAGGGGCGA 683 |||||||||||||||||||||||| Sbjct 2512 CGTCAAATTTGGGTATAGGGGCGA 2489 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 2079953281900