Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fomitopsis_20pinicola_20[genbank_20GCA_5F001931775.1_202017-01-04]
2,178 sequences; 45,982,938 total letters
Query= AAMG01001382.1
Length=124
Score E
Sequences producing significant alignments: (Bits) Value
seq1335 118 6e-25
seq997 100 2e-19
>seq1335
Length=43126
Score = 118 bits (130), Expect = 6e-25
Identities = 97/112 (87%), Gaps = 6/112 (5%)
Strand=Plus/Plus
Query 13 CCGTTCGCCGGGTCCACAAAGCCAATTCCGAAAGTTCTCACTAAGCCATTTCATTCGGTA 72
||||| ||||| ||| | |||||||| || ||| |||||||||||||| || ||||||
Sbjct 37458 CCGTT-GCCGGCTCCCCGAAGCCAATCCC--AAGACCTCACTAAGCCATT-CAATCGGTA 37513
Query 73 GTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGACGTAATACAACGCAAGCT 124
||| ||||||||||| |||||||||||||||||||||||| |||||| ||||
Sbjct 37514 GTA-GCGACGGGCGGTGTGTACAAAGGGCAGGGACGTAAT-CAACGCGAGCT 37563
Score = 100 bits (110), Expect = 2e-19
Identities = 82/95 (86%), Gaps = 5/95 (5%)
Strand=Plus/Plus
Query 13 CCGTTCGCCGGGTCCACAAAGCCAATTCCGAAAGTTCTCACTAAGCCATTTCATTCGGTA 72
||||| ||||| ||| | |||||||| || ||| |||||||||||||| || ||||||
Sbjct 36620 CCGTT-GCCGGCTCCCCGAAGCCAATCCC--AAGACCTCACTAAGCCATT-CAATCGGTA 36675
Query 73 GTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGAC 107
||| ||||||||||| |||||||||||||||||||
Sbjct 36676 GTA-GCGACGGGCGGTGTGTACAAAGGGCAGGGAC 36709
>seq997
Length=1254
Score = 100 bits (110), Expect = 2e-19
Identities = 82/95 (86%), Gaps = 5/95 (5%)
Strand=Plus/Minus
Query 13 CCGTTCGCCGGGTCCACAAAGCCAATTCCGAAAGTTCTCACTAAGCCATTTCATTCGGTA 72
||||| ||||| ||| | |||||||| || ||| |||||||||||||| || ||||||
Sbjct 507 CCGTT-GCCGGCTCCCCGAAGCCAATCCC--AAGACCTCACTAAGCCATT-CAATCGGTA 452
Query 73 GTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGAC 107
||| ||||||||||| |||||||||||||||||||
Sbjct 451 GTA-GCGACGGGCGGTGTGTACAAAGGGCAGGGAC 418
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 300793858040
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |