Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fomitopsis_20pinicola_20[genbank_20GCA_5F001931775.1_202017-01-04] 2,178 sequences; 45,982,938 total letters Query= AAMG01001634.1 Length=217 Score E Sequences producing significant alignments: (Bits) Value seq1335 214 2e-53 seq1661 203 4e-50 >seq1335 Length=43126 Score = 214 bits (236), Expect = 2e-53 Identities = 167/197 (85%), Gaps = 2/197 (1%) Strand=Plus/Plus Query 1 CGTCTCTAGAAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGT 60 || ||||||||||||||||||||| ||||||||||||| ||||||||||||||||||| Sbjct 38315 CGACTCTAGAAACCAACAAAATAGAACCGCACGTCCTATTTTATTATTCCATGCTAATGT 38374 Query 61 ATTCGGGCGTAAGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAGTCCTGGTTCCT 120 |||||||| | ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 38375 ATTCGGGCACAGGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAGTCCTGGTTCCC 38434 Query 121 CCGCACA-CCAATGAA-GGCATACGGGCTCACCAAGAGGTAGGGCTGGGTAATGCAGTAC 178 | |||| ||| |||| ||||| | |||||||||||||||| | | | | |||||| Sbjct 38435 CGACACACCCAGTGAAGGGCATGCCGGCTCACCAAGAGGTAAGACCCAGCCAGACAGTAC 38494 Query 179 TCGCCGTGAGGCGGACC 195 |||| |||| |||| Sbjct 38495 ATACCGTTAGGCAGACC 38511 >seq1661 Length=12195 Score = 203 bits (224), Expect = 4e-50 Identities = 163/194 (84%), Gaps = 2/194 (1%) Strand=Plus/Plus Query 4 CTCTAGAAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATT 63 ||||||||||||||||||||| | ||| ||||||| |||||||||||||||||||||| Sbjct 9939 CTCTAGAAACCAACAAAATAGAACCACACATCCTATTTTATTATTCCATGCTAATGTATT 9998 Query 64 CGGGCGTAAGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAGTCCTGGTTCCTCCG 123 ||||| | ||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct 9999 CGGGCACAGGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAGTCCTGGTTCCCCGA 10058 Query 124 CACA-CCAATGAA-GGCATACGGGCTCACCAAGAGGTAGGGCTGGGTAATGCAGTACTCG 181 |||| ||| |||| ||||| | |||||||||||||||| | | | | |||||| Sbjct 10059 CACACCCAGTGAAGGGCATGCCGGCTCACCAAGAGGTAAGACCCAGCCAGACAGTACATA 10118 Query 182 CCGTGAGGCGGACC 195 |||| |||| |||| Sbjct 10119 CCGTTAGGCAGACC 10132 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 595187441652