Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fomitopsis_20pinicola_20[genbank_20GCA_5F001931775.1_202017-01-04]
2,178 sequences; 45,982,938 total letters
Query= AAMG01001634.1
Length=217
Score E
Sequences producing significant alignments: (Bits) Value
seq1335 214 2e-53
seq1661 203 4e-50
>seq1335
Length=43126
Score = 214 bits (236), Expect = 2e-53
Identities = 167/197 (85%), Gaps = 2/197 (1%)
Strand=Plus/Plus
Query 1 CGTCTCTAGAAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGT 60
|| ||||||||||||||||||||| ||||||||||||| |||||||||||||||||||
Sbjct 38315 CGACTCTAGAAACCAACAAAATAGAACCGCACGTCCTATTTTATTATTCCATGCTAATGT 38374
Query 61 ATTCGGGCGTAAGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAGTCCTGGTTCCT 120
|||||||| | |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 38375 ATTCGGGCACAGGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAGTCCTGGTTCCC 38434
Query 121 CCGCACA-CCAATGAA-GGCATACGGGCTCACCAAGAGGTAGGGCTGGGTAATGCAGTAC 178
| |||| ||| |||| ||||| | |||||||||||||||| | | | | ||||||
Sbjct 38435 CGACACACCCAGTGAAGGGCATGCCGGCTCACCAAGAGGTAAGACCCAGCCAGACAGTAC 38494
Query 179 TCGCCGTGAGGCGGACC 195
|||| |||| ||||
Sbjct 38495 ATACCGTTAGGCAGACC 38511
>seq1661
Length=12195
Score = 203 bits (224), Expect = 4e-50
Identities = 163/194 (84%), Gaps = 2/194 (1%)
Strand=Plus/Plus
Query 4 CTCTAGAAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATT 63
||||||||||||||||||||| | ||| ||||||| ||||||||||||||||||||||
Sbjct 9939 CTCTAGAAACCAACAAAATAGAACCACACATCCTATTTTATTATTCCATGCTAATGTATT 9998
Query 64 CGGGCGTAAGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAGTCCTGGTTCCTCCG 123
||||| | ||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct 9999 CGGGCACAGGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAGTCCTGGTTCCCCGA 10058
Query 124 CACA-CCAATGAA-GGCATACGGGCTCACCAAGAGGTAGGGCTGGGTAATGCAGTACTCG 181
|||| ||| |||| ||||| | |||||||||||||||| | | | | ||||||
Sbjct 10059 CACACCCAGTGAAGGGCATGCCGGCTCACCAAGAGGTAAGACCCAGCCAGACAGTACATA 10118
Query 182 CCGTGAGGCGGACC 195
|||| |||| ||||
Sbjct 10119 CCGTTAGGCAGACC 10132
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 595187441652
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |