Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fomitopsis_20pinicola_20[genbank_20GCA_5F001931775.1_202017-01-04] 2,178 sequences; 45,982,938 total letters Query= AAMG01001884.1 Length=191 Score E Sequences producing significant alignments: (Bits) Value seq1335 239 5e-61 seq1661 215 5e-54 >seq1335 Length=43126 Score = 239 bits (264), Expect = 5e-61 Identities = 167/189 (88%), Gaps = 1/189 (1%) Strand=Plus/Minus Query 1 GGAACCAGGACTTTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCCTTTGCTCGAATA 60 ||||||||||||||||| |||| |||||||||| ||||||||||||||| ||| |||||| Sbjct 38433 GGAACCAGGACTTTTACCTTGAGAAAATTAGAGTGTTCAAAGCAGGCCTGTGCCCGAATA 38374 Query 61 CATTACCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGC 120 ||||| |||||||||||| ||||||||||||||||||||||||| ||||||||| || Sbjct 38373 CATTAGCATGGAATAATAAAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGAGTCG- 38315 Query 121 CCGTAATGATAAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTC 180 |||||||||| |||| ||||||| ||||| | |||||||| ||| | ||||||||||| Sbjct 38314 CCGTAATGATTAATAGGGATAGTTGGGGGCATTAGTATTCAGTTGCTAGAGGTGAAATTC 38255 Query 181 TTGGATTTA 189 ||||||||| Sbjct 38254 TTGGATTTA 38246 >seq1661 Length=12195 Score = 215 bits (238), Expect = 5e-54 Identities = 162/189 (86%), Gaps = 1/189 (1%) Strand=Plus/Minus Query 1 GGAACCAGGACTTTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCCTTTGCTCGAATA 60 ||||||||||||||||| |||| |||||||||| ||||||||||||||| ||| |||||| Sbjct 10054 GGAACCAGGACTTTTACCTTGAGAAAATTAGAGTGTTCAAAGCAGGCCTGTGCCCGAATA 9995 Query 61 CATTACCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGC 120 ||||| |||||||||||| ||||||| ||| ||||||||||||| |||||||| || Sbjct 9994 CATTAGCATGGAATAATAAAATAGGATGTGTGGTTCTATTTTGTTGGTTTCTA-GAGTTG 9936 Query 121 CCGTAATGATAAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTC 180 | |||||||| ||| ||||||| ||||| | |||||||| ||| | ||||||||||| Sbjct 9935 CTGTAATGATTTATAGGGATAGTTGGGGGCATTAGTATTCAGTTGCTAGAGGTGAAATTC 9876 Query 181 TTGGATTTA 189 ||||||||| Sbjct 9875 TTGGATTTA 9867 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 511989197120