Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fomitopsis_20pinicola_20[genbank_20GCA_5F001931775.1_202017-01-04]
2,178 sequences; 45,982,938 total letters
Query= AAMG01001884.1
Length=191
Score E
Sequences producing significant alignments: (Bits) Value
seq1335 239 5e-61
seq1661 215 5e-54
>seq1335
Length=43126
Score = 239 bits (264), Expect = 5e-61
Identities = 167/189 (88%), Gaps = 1/189 (1%)
Strand=Plus/Minus
Query 1 GGAACCAGGACTTTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCCTTTGCTCGAATA 60
||||||||||||||||| |||| |||||||||| ||||||||||||||| ||| ||||||
Sbjct 38433 GGAACCAGGACTTTTACCTTGAGAAAATTAGAGTGTTCAAAGCAGGCCTGTGCCCGAATA 38374
Query 61 CATTACCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGC 120
||||| |||||||||||| ||||||||||||||||||||||||| ||||||||| ||
Sbjct 38373 CATTAGCATGGAATAATAAAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGAGTCG- 38315
Query 121 CCGTAATGATAAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTC 180
|||||||||| |||| ||||||| ||||| | |||||||| ||| | |||||||||||
Sbjct 38314 CCGTAATGATTAATAGGGATAGTTGGGGGCATTAGTATTCAGTTGCTAGAGGTGAAATTC 38255
Query 181 TTGGATTTA 189
|||||||||
Sbjct 38254 TTGGATTTA 38246
>seq1661
Length=12195
Score = 215 bits (238), Expect = 5e-54
Identities = 162/189 (86%), Gaps = 1/189 (1%)
Strand=Plus/Minus
Query 1 GGAACCAGGACTTTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCCTTTGCTCGAATA 60
||||||||||||||||| |||| |||||||||| ||||||||||||||| ||| ||||||
Sbjct 10054 GGAACCAGGACTTTTACCTTGAGAAAATTAGAGTGTTCAAAGCAGGCCTGTGCCCGAATA 9995
Query 61 CATTACCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGC 120
||||| |||||||||||| ||||||| ||| ||||||||||||| |||||||| ||
Sbjct 9994 CATTAGCATGGAATAATAAAATAGGATGTGTGGTTCTATTTTGTTGGTTTCTA-GAGTTG 9936
Query 121 CCGTAATGATAAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTC 180
| |||||||| ||| ||||||| ||||| | |||||||| ||| | |||||||||||
Sbjct 9935 CTGTAATGATTTATAGGGATAGTTGGGGGCATTAGTATTCAGTTGCTAGAGGTGAAATTC 9876
Query 181 TTGGATTTA 189
|||||||||
Sbjct 9875 TTGGATTTA 9867
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 511989197120
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |