Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fomitopsis_20pinicola_20[genbank_20GCA_5F001931775.1_202017-01-04] 2,178 sequences; 45,982,938 total letters Query= AAMG01001962.1 Length=275 Score E Sequences producing significant alignments: (Bits) Value seq152 78.8 1e-12 >seq152 Length=72955 Score = 78.8 bits (86), Expect = 1e-12 Identities = 87/116 (75%), Gaps = 0/116 (0%) Strand=Plus/Plus Query 160 GATAGGGACCGAACTGTCTCGCGACGTTCTGAACCCAGCTCGCGTGCCTCTTTAATGGGC 219 |||||||||| |||| ||| || ||| | |||||| ||||||| | |||||| ||| Sbjct 8573 GATAGGGACCATACTGACTCACGTCGTATTAAACCCAACTCGCGTAACCTTTTAATCGGC 8632 Query 220 GAACAGCCCAACCCTTGGGACCTACTTCAGCCCCAGGATGAGACGAGCCGACATCG 275 |||||||| ||||||| | || |||| || ||||| | ||| |||||||| Sbjct 8633 GAACAGCCGAACCCTTCCAATCTTTTTCACCCGGAGGATAGGTTGAGTCGACATCG 8688 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 780783525608