Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fomitopsis_20pinicola_20[genbank_20GCA_5F001931775.1_202017-01-04] 2,178 sequences; 45,982,938 total letters Query= AAMG01002186.1 Length=328 Score E Sequences producing significant alignments: (Bits) Value seq1335 448 9e-124 seq813 224 2e-56 >seq1335 Length=43126 Score = 448 bits (496), Expect = 9e-124 Identities = 286/310 (92%), Gaps = 1/310 (0%) Strand=Plus/Minus Query 20 GAGCGAGACCTTAACCTGCTAAATAGCCAGGCCCGCTTTGGCGGGTCGCCGGCTTCTTAG 79 || |||||||||||||| || |||||||||||| ||||| || ||||||||||||||||| Sbjct 37841 GAACGAGACCTTAACCTACTTAATAGCCAGGCCGGCTTTTGCTGGTCGCCGGCTTCTTAG 37782 Query 80 AGGGACTATCGGC-TCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTGATGCCCTT 138 ||||||| || | || | | || |||||||||||||||||||||||||||||||||||| Sbjct 37781 AGGGACTGTCAGTGTCTAACTGACGGAAGTTTGAGGCAATAACAGGTCTGTGATGCCCTT 37722 Query 139 AGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCACCTTGGCC 198 |||||||||||||||||||||||||||||||||||||||| |||||| | |||||||| Sbjct 37721 AGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAGCGAGTTTTTTTCCTTGGCC 37662 Query 199 GGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTGCAATTATT 258 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct 37661 GGAAGGTCTGGGTAATCTTGTGAAACTCTGTCGTGCTGGGGATAGAGCATTGCAATTATT 37602 Query 259 GCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATTACGTCCCT 318 ||||||||||||||||| ||||||||||| | ||||||||| |||||||||||||||||| Sbjct 37601 GCTCTTCAACGAGGAATACCTAGTAAGCGTGAGTCATCAGCTCGCGTTGATTACGTCCCT 37542 Query 319 GCCCTTTGTA 328 |||||||||| Sbjct 37541 GCCCTTTGTA 37532 >seq813 Length=52022 Score = 224 bits (248), Expect = 2e-56 Identities = 133/139 (96%), Gaps = 0/139 (0%) Strand=Plus/Minus Query 132 TGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCAC 191 ||||||||||||||||||||||||||||||||||||||||||||||| |||||| | | Sbjct 328 TGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAGCGAGTTTTTTTC 269 Query 192 CTTGGCCGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTGC 251 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct 268 CTTGGCCGGAAGGTCTGGGTAATCTTGTGAAACTCTGTCGTGCTGGGGATAGAGCATTGC 209 Query 252 AATTATTGCTCTTCAACGA 270 ||||||||||||||||||| Sbjct 208 AATTATTGCTCTTCAACGA 190 Score = 161 bits (178), Expect = 2e-37 Identities = 98/104 (94%), Gaps = 0/104 (0%) Strand=Plus/Minus Query 167 CTGACAGAGCCAACGAGTTCATCACCTTGGCCGGAAGGTCTGGGTAATCTTGTTAAACTC 226 |||||||||||| |||||| | ||||||||||||||||||||||||||||| |||||| Sbjct 188 CTGACAGAGCCAGCGAGTTTTTTTCCTTGGCCGGAAGGTCTGGGTAATCTTGTGAAACTC 129 Query 227 TGTCGTGCTGGGGATAGAGCATTGCAATTATTGCTCTTCAACGA 270 |||||||||||||||||||||||||||||||||||||||||||| Sbjct 128 TGTCGTGCTGGGGATAGAGCATTGCAATTATTGCTCTTCAACGA 85 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 947179369984